RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 HINT2Q9BX68 163 aa16.03■□□□□ 0.16
CDCA4-202ENST00000392590 TMEM222Q9H0R3 208 aa16.03■□□□□ 0.16
CDCA4-202ENST00000392590 AKIP1Q9NQ31 210 aa16.03■□□□□ 0.16
CDCA4-202ENST00000392590 FAM223BA6NKX1 122 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 RBMXL2O75526 392 aaKnown RBP16.02■□□□□ 0.15
CDCA4-202ENST00000392590 IGKV1-5P01602 117 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 DEFA4P12838 97 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 CTRB1P17538 263 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 AKR1C2P52895 323 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 CTRB2Q6GPI1 263 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 THOC7Q6I9Y2 204 aaKnown RBP16.02■□□□□ 0.15
CDCA4-202ENST00000392590 C19orf35Q6ZS72 473 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 FAM223AQ8IWN6 122 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 NECAP1Q8NC96 275 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 OR5B3Q8NH48 314 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 GLYATL2Q8WU03 294 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 NDUFA4L2Q9NRX3 87 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM14BQ9NUH8 114 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 KCNIP3Q9Y2W7 256 aa16.02■□□□□ 0.15
CDCA4-202ENST00000392590 IGHV4OR15-8A0A075B7B6 117 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 A0A087WW49 117 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 IGLC7A0M8Q6 106 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 C15orf61A6NNL5 157 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 OR2J3O76001 311 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 CDS2O95674 445 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 DEFA6Q01524 100 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 DHODHQ02127 395 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 ATP5G2Q06055 141 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 BEAN1Q3B7T3 259 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 HSD17B13Q7Z5P4 300 aaPredicted RBP16.01■□□□□ 0.15
CDCA4-202ENST00000392590 OR10W1Q8NGF6 305 aa16.01■□□□□ 0.15
CDCA4-202ENST00000392590 SLC25A21Q9BQT8 299 aaPredicted RBP16.01■□□□□ 0.15
CDCA4-202ENST00000392590 RANGRFQ9HD47 186 aaPredicted RBP16.01■□□□□ 0.15
CDCA4-202ENST00000392590 ANKRD34BA5PLL1 514 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 DBX1A6NMT0 343 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 AKR1C4P17516 323 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 ZNF343Q6P1L6 599 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM230Q96A57 120 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 RRNAD1Q96FB5 475 aaKnown RBP16■□□□□ 0.15
CDCA4-202ENST00000392590 BATF3Q9NR55 127 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 FBXL7Q9UJT9 491 aa16■□□□□ 0.15
CDCA4-202ENST00000392590 LINC00854A0A1B0GVQ3 168 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 OR13C7P0DN81 318 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 HIST1H1BP16401 226 aaKnown RBP15.99■□□□□ 0.15
CDCA4-202ENST00000392590 IZUMO4Q1ZYL8 232 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 KPRPQ5T749 579 aaPredicted RBP15.99■□□□□ 0.15
CDCA4-202ENST00000392590 LINC00299Q6ZSB3 139 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 RNASE11Q8TAA1 199 aaKnown RBP15.99■□□□□ 0.15
CDCA4-202ENST00000392590 LSM10Q969L4 123 aaKnown RBP15.99■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM56Q96MV1 263 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 FANCD2OSQ96PS1 177 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 GPR61Q9BZJ8 451 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 CMYA5Q8N3K9 4069 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 NAP1L6A6NFF2 107 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 P0C879 139 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 IL7P13232 177 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 SLURP1P55000 103 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 WT1-ASQ06250 92 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 C15orf32Q32M92 178 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 TMED4Q7Z7H5 227 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 DCUN1D4Q92564 292 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 GALNT14Q96FL9 552 aa15.99■□□□□ 0.15
CDCA4-202ENST00000392590 PEF1Q9UBV8 284 aaKnown RBP15.99■□□□□ 0.15
CDCA4-202ENST00000392590 MECP2P51608 486 aaKnown RBP15.98■□□□□ 0.15
CDCA4-202ENST00000392590 HSPE1P61604 102 aaKnown RBP15.98■□□□□ 0.15
CDCA4-202ENST00000392590 SELENOHQ8IZQ5 122 aaKnown RBP15.98■□□□□ 0.15
CDCA4-202ENST00000392590 LHFPL5Q8TAF8 219 aa15.98■□□□□ 0.15
CDCA4-202ENST00000392590 DLX4Q92988 240 aaPredicted RBP15.98■□□□□ 0.15
CDCA4-202ENST00000392590 RBPMSQ93062 196 aaKnown RBP15.98■□□□□ 0.15
CDCA4-202ENST00000392590 A0A0B4J293 547 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 CENPXA8MT69 81 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 NDUFB8O95169 186 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 EXOSC2Q13868 293 aaKnown RBP15.97■□□□□ 0.15
CDCA4-202ENST00000392590 KLK9Q2XQG4 91 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM268Q5VZI3 342 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 ZNF429Q86V71 674 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 KLK9Q9UKQ9 250 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM56-RWDD3S4R434 201 aa15.97■□□□□ 0.15
CDCA4-202ENST00000392590 NOTCH3Q9UM47 2321 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 IGLV11-55A0A075B6I3 123 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 OVOL1O14753 267 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 ANXA3P12429 323 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 ZP3P21754 424 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 HOXD3P31249 432 aaPredicted RBP15.96■□□□□ 0.15
CDCA4-202ENST00000392590 CCR6P51684 374 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 TMEM187Q14656 261 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 FAM219AQ8IW50 185 aa15.96■□□□□ 0.15
CDCA4-202ENST00000392590 A0A0G2JRQ6 117 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 SEC14L6B5MCN3 397 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 CYB5BO43169 146 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 SUPT4H1P63272 117 aaKnown RBP15.95■□□□□ 0.14
CDCA4-202ENST00000392590 PRCDQ00LT1 54 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 RBMS2Q15434 407 aaKnown RBP15.95■□□□□ 0.14
CDCA4-202ENST00000392590 TMEM128Q5BJH2 165 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 IL22RA2Q969J5 263 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 C7orf50Q9BRJ6 194 aaKnown RBP15.95■□□□□ 0.14
CDCA4-202ENST00000392590 PTTG2Q9NZH5 202 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 THYN1Q9P016 225 aa15.95■□□□□ 0.14
CDCA4-202ENST00000392590 TRBV12-3P01733 135 aa15.94■□□□□ 0.14
CDCA4-202ENST00000392590 C9orf66Q5T8R8 295 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms