RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 RHOBP62745 196 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PSG9Q00887 426 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF154Q13106 437 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 STUMQ69YW2 141 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR51T1Q8NGJ9 327 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NEUROG1Q92886 237 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TRBV9A0A0B4J1U6 114 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 S1PR2O95136 353 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMEM50AO95807 157 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TTRP02766 147 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CEACAM3P40198 252 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 GPR6P46095 362 aaPredicted RBP9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR3A4PP47883 348 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 FABP6P51161 128 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SELENOVP59797 346 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 WBP2NLQ6ICG8 309 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TCF23Q7RTU1 214 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR1K1Q8NGR3 316 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MDFIQ99750 246 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 VSIRQ9H7M9 311 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 YAE1D1Q9NRH1 226 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 FAM206AQ9NX38 181 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PEF1Q9UBV8 284 aaKnown RBP9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 POLR1DQ9Y2S0 133 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ROS1P08922 2347 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 E7EQL1 145 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SLC16A7O60669 478 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 BLVRBP30043 206 aaPredicted RBP9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 EFNA4P52798 201 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR1B1Q8NGR6 318 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LHX4Q969G2 390 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KCNS1Q96KK3 526 aa9.46□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PHF1O43189 567 aaPredicted RBP9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 GNG7O60262 68 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 ZNF20P17024 532 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 ZNF83P51522 516 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 PAX9P55771 341 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 BVES-AS1Q5T3Y7 98 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 C1orf122Q6ZSJ8 110 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 OR1N2Q8NGR9 330 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 TMEM158Q8WZ71 300 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 CYYR1Q96J86 154 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 FAM103A1Q9BTL3 118 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 SLC39A9Q9NUM3 307 aa9.46□□□□□ -0.9
TRAF3IP2-208ENST00000392556 MAP1AP78559 2803 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 A0A1W2PP11 408 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 H0YJW9 148 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 M0R1B8 84 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 MT-CO2P00403 227 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 RPL27P61353 136 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 EGR4Q05215 589 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 HLA-DRB5Q30154 266 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 CXorf66Q5JRM2 361 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 OTPQ5XKR4 325 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 C12orf54Q6X4T0 127 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 FAM168AQ92567 244 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 CSPG4Q6UVK1 2322 aa9.45□□□□□ -0.9
TRAF3IP2-208ENST00000392556 LIPT2A6NK58 231 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 M0R1X1 148 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 AMTP48728 403 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 C5orf64Q2M2E5 130 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 LRRC75BQ2VPJ9 315 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 TSPO2Q5TGU0 170 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 AAED1Q7RTV5 226 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 WDR31Q8NA23 367 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 STXBP6Q8NFX7 210 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 OR10P1Q8NGE3 313 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 OR4F5Q8NH21 305 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 SLC25A40Q8TBP6 338 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 OR2V2Q96R30 315 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 TMEM222Q9H0R3 208 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 SLC7A10Q9NS82 523 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 ATP23Q9Y6H3 246 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 A0A096LNT2 108 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 C3orf85A0A1B0GTC6 90 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 A0A1W2PS18 150 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 CHST1O43916 411 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 IGHV3-9P01782 118 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 CTLA4P16410 223 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 THBS3P49746 956 aa9.44□□□□□ -0.9
TRAF3IP2-208ENST00000392556 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms