RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 FAM111AQ96PZ2 611 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GSDMAQ96QA5 445 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR5B12Q96R08 314 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 APOL4Q9BPW4 351 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CENPOQ9BU64 300 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TRIM62Q9BVG3 475 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 FBXL15Q9H469 300 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TMEM100Q9NV29 134 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 POMPQ9Y244 141 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SNX8Q9Y5X2 465 aa-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PRDM15P57071 1507 aaPredicted RBP-3.81□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SEC14L6B5MCN3 397 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 C9JCJ5 164 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GPR171O14626 319 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 NME6O75414 186 aaPredicted RBP-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ATP5LO75964 103 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 COX6A1P12074 109 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 MARCKSP29966 332 aaPredicted RBP-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 RGS4P49798 205 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 RAB28P51157 221 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 IDI1Q13907 227 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 MAPK6Q16659 721 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 Q499Y3 187 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 EPGNQ6UW88 154 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 COPS6Q7L5N1 327 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 EFL1Q7Z2Z2 1120 aaKnown RBP-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PLCZ1Q86YW0 608 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SERPINA12Q8IW75 414 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SLC35F2Q8IXU6 374 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 LINC00301Q8NCQ3 95 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR10T2Q8NGX3 314 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TBRG4Q969Z0 631 aaKnown RBP eCLIP-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 MYLPFQ96A32 169 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ERP27Q96DN0 273 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ANAPC13Q9BS18 74 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR51E2Q9H255 320 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR51I1Q9H343 314 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 NUDCQ9Y266 331 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TTC41PQ6P2S7 1318 aa-3.82□□□□□ -3.02
RNU6-1340P-201ENST00000384438 KANK1Q14678 1352 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TRAV12-2A0A075B6T6 113 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CCDC196A0A1B0GTZ2 297 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OOEPA6NGQ2 149 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 HIGD1CA8MV81 97 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 HMGB1P1B2RPK0 211 aaPredicted RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 RAD51CO43502 376 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ERC2-IT1O76042 136 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CA2P00918 260 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GYPBP06028 91 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CT45A6P0DMU7 189 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CT45A5P0DMU8 189 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CT45A7P0DMV0 189 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 COX4I1P13073 169 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 EIF5AP63241 154 aaKnown RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 KLRB1Q12918 225 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TAF1AQ15573 450 aaPredicted RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GLRA4Q5JXX5 417 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ATP11AUNQ6ZP68 121 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 DPY19L4Q7Z388 723 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 ARHGAP18Q8N392 663 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 NKAIN3Q8N8D7 197 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PI4KAP1Q8N8J0 262 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 Q8NFD4 153 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CT45A3Q8NHU0 189 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 DYNC2LI1Q8TCX1 351 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 DQX1Q8TE96 717 aaKnown RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 UBLCP1Q8WVY7 318 aaPredicted RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 TEKT1Q969V4 418 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SENP8Q96LD8 212 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 C9orf72Q96LT7 481 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 MRPL34Q9BQ48 92 aaKnown RBP-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SLF1Q9BQI6 1058 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 NAPBQ9H115 298 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 C14orf132Q9NPU4 83 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SLC35D1Q9NTN3 355 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 SCN3BQ9NY72 215 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 BCAP29Q9UHQ4 241 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PCTPQ9UKL6 214 aa-3.83□□□□□ -3.02
RNU6-1340P-201ENST00000384438 NUP210Q8TEM1 1887 aaPredicted RBP-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 E7EUB6 86 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CLDN3O15551 220 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 FLOT1O75955 427 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GGPS1O95749 300 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 AGR2O95994 175 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 FBP1P09467 338 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CCL3L1P16619 93 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 GLRXP35754 106 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PSMB2P49721 201 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 EIF2B2P49770 351 aaKnown RBP-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 H3F3AP84243 136 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PRDX1Q06830 199 aaKnown RBP-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 PDZK1IP1Q13113 114 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 RHEBQ15382 184 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 DEFB136Q30KP8 78 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 CLEC19AQ6UXS0 136 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 WFDC13Q8IUB5 93 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 BHLHE23Q8NDY6 225 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR4S1Q8NGB4 309 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR4E2Q8NGC2 313 aa-3.84□□□□□ -3.02
RNU6-1340P-201ENST00000384438 OR6K3Q8NGY3 331 aa-3.84□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms