RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SCP2D1Q9UJQ7 156 aa7.15□□□□□ -1.26
HMGN1-202ENST00000380747 NSG2Q9Y328 171 aa7.15□□□□□ -1.26
HMGN1-202ENST00000380747 A0A0G2JLM5 398 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TEX13DA0A0J9YY54 714 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-202ENST00000380747 C3orf85A0A1B0GTC6 90 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 E7EUB6 86 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 LINC01619G3V211 115 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 H0Y980 276 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 REG1AP05451 166 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 OR8U8P0C7N1 319 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 AREGP15514 252 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 PTBP1P26599 531 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGN1-202ENST00000380747 FAUP35544 74 aaKnown RBP7.14□□□□□ -1.27
HMGN1-202ENST00000380747 AP3S2P59780 193 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 OR2B8PP59922 312 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 RHOGP84095 191 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 RUNX1Q01196 453 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TRIM16LQ309B1 348 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 SP6Q3SY56 376 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 C19orf35Q6ZS72 473 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 H2BFWTQ7Z2G1 175 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TOMM5Q8N4H5 51 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TRIM63Q969Q1 353 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 MRGPRFQ96AM1 343 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 TP53RKQ96S44 253 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 HINT2Q9BX68 163 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 FAM212BQ9NTI7 297 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-202ENST00000380747 OR51B2Q9Y5P1 312 aa7.14□□□□□ -1.27
HMGN1-202ENST00000380747 IGHV4OR15-8A0A075B7B6 117 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 A0A087WW49 117 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 TEX50A0A1B0GTY4 177 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 A0A1B0GW64 132 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 CGB1A6NKQ9 187 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 OR2J3O76001 311 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 BRI3O95415 125 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 DUS4LO95620 317 aaKnown RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 IGKV1-39P01597 117 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 IGKV1D-39P04432 117 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 HSPB1P04792 205 aaKnown RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 PSMB6P28072 239 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 ETV6P41212 452 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 INPP1P49441 399 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 SLURP1P55000 103 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 ZNF45Q02386 682 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 FHL3Q13643 280 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 KLF9Q13886 244 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 SURF2Q15527 256 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 ZNF57Q68EA5 555 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 OR4A16Q8NH70 328 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 DCUN1D4Q92564 292 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 RTBDNQ9BSG5 229 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
HMGN1-202ENST00000380747 GPR61Q9BZJ8 451 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 SRRQ9GZT4 340 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 AKIP1Q9NQ31 210 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 SLC2A8Q9NY64 477 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 PRNDQ9UKY0 176 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 GPR132Q9UNW8 380 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 ZNF257Q9Y2Q1 563 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 PLXNB1O43157 2135 aa7.13□□□□□ -1.27
HMGN1-202ENST00000380747 FAM223BA6NKX1 122 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 RBMXL2O75526 392 aaKnown RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 ATG12O94817 140 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 DHFRP00374 187 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 TRAPPC2P0DI81 140 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 TRAPPC2BP0DI82 140 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 DEFA4P12838 97 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 AKR1C2P52895 323 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 ATP5G2Q06055 141 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 EXOSC2Q13868 293 aaKnown RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 TRIQKQ629K1 86 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 OR10W1Q8NGF6 305 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 RNASE11Q8TAA1 199 aaKnown RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 MRAPQ8TCY5 172 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 SEC22AQ96IW7 307 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 USMG5Q96IX5 58 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 SCGB3A2Q96PL1 93 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 TSC22D3Q99576 134 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 C5orf66Q9H5L9 145 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 NAA60Q9H7X0 242 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 RANGRFQ9HD47 186 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-202ENST00000380747 FKBP11Q9NYL4 201 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
HMGN1-202ENST00000380747 SACSQ9NZJ4 4579 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 TRBV9A0A0B4J1U6 114 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 LINC00854A0A1B0GVQ3 168 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 IGLC7A0M8Q6 106 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 CRYM-AS1A6NIL9 109 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 DBX1A6NMT0 343 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms