RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 OR11H1Q8NG94 326 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 TACC2O95359 2948 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 DOCK10Q96BY6 2186 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 IGLV1-36A0A0B4J1U3 117 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF154Q13106 437 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 C6orf201Q7Z4U5 140 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR2C3Q8N628 320 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 TMEM217Q8N7C4 229 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 RAB40CQ96S21 281 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 PSMG3Q9BT73 122 aaPredicted RBP9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 CSPG4Q6UVK1 2322 aa9.13□□□□□ -0.95
PCDHGA1-201ENST00000378105 TRAV1-2A0A0B4J238 106 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 SPINT2O43291 252 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF728P0DKX0 622 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ICAM4Q14773 271 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR2T10Q8NGZ9 312 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 AQP3Q92482 292 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ARHGAP5-AS1Q96IT6 56 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 UHRF2Q96PU4 802 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 LMX1BO60663 402 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ERVK-16P61578 105 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 TNFAIP6P98066 277 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 LRRC75BQ2VPJ9 315 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ACP7Q6ZNF0 438 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 SH2D6Q7Z4S9 175 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 DPRXA6NFQ7 191 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 PHF1O43189 567 aaPredicted RBP9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 HRH1P35367 487 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 CCL8P80075 99 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 TESK1Q15569 626 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF441Q8N8Z8 693 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 C1orf123Q9NWV4 160 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 LHFPL6Q9Y693 200 aa9.12□□□□□ -0.95
PCDHGA1-201ENST00000378105 CEBPZOSA8MTT3 80 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 TCL1AP56279 114 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 HES1Q14469 280 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 TIGITQ495A1 244 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 LRRC29Q8WV35 223 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 PGLYRP3Q96LB9 341 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 GPX7Q96SL4 187 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 SSBP4Q9BWG4 385 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 CLCF1Q9UBD9 225 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 PIN1P1O15428 100 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 LGALS4P56470 323 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 CATR1Q13166 79 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 SLC25A30Q5SVS4 291 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 ISLRO14498 428 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 NGFP01138 241 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 TNFRSF1AP19438 455 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 ADMP35318 185 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 PLA2G5P39877 138 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF439Q8NDP4 499 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 SPSB4Q96A44 273 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF488Q96MN9 340 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 SMIM7Q9BQ49 75 aa9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
PCDHGA1-201ENST00000378105 EFNA2O43921 213 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 CTRLP40313 264 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 CA7P43166 264 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 PSG3Q16557 428 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 LINC01590Q5TEZ4 76 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 SLC25A47Q6Q0C1 308 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 MED12LQ86YW9 2145 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 BORCS7-ASMTA0A0B4J1R7 106 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 IGHV2-26A0A0B4J1V2 119 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 CBLN1P23435 193 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 INSL3P51460 131 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 RUNX1Q01196 453 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 NPFFR1Q9GZQ6 430 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 A0A1W2PP11 408 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 A1L4Q6 167 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 MSTNO14793 375 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 CRISP2P16562 243 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 RPS4XP62701 263 aaKnown RBP9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 TCTEX1D4Q5JR98 221 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 AQP10Q96PS8 301 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 TAAR6Q96RI8 345 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 MCRIP2Q9BUT9 160 aaKnown RBP9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 KIR2DS1A0A191URI9 304 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 LRRC3CA6NJW4 275 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 KIAA1324LA8MWY0 1029 aaPredicted RBP9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 ETV2O00321 342 aaPredicted RBP9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 KIR2DS4P43632 304 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 CYCSP99999 105 aaKnown RBP9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 KLRB1Q12918 225 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms