RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 SSBP2P81877 361 aaPredicted RBP9.97□□□□□ -0.81
VPS13A-205ENST00000376636 CENPVQ7Z7K6 275 aaPredicted RBP9.97□□□□□ -0.81
VPS13A-205ENST00000376636 IZUMO1RA6ND01 250 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 PRSS23O95084 383 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 DCAF10Q5QP82 559 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 LINC01555Q8NAE3 123 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 KIAA1551Q9HCM1 1747 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 COX6B1P14854 86 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 MSRB3Q8IXL7 192 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 CASP8AP2Q9UKL3 1982 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 PPBPP02775 128 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 TMEM190Q8WZ59 177 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 VKORC1Q9BQB6 163 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 REG1AP05451 166 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 PRSS41Q7RTY9 318 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 PTPRFP10586 1907 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 HBDP02042 147 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 CTGFP29279 349 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 CT83Q5H943 113 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 JPT1Q9UK76 154 aa9.97□□□□□ -0.81
VPS13A-205ENST00000376636 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.81
VPS13A-205ENST00000376636 SCTP09683 121 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 SPEM2Q0P670 501 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.81
VPS13A-205ENST00000376636 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 A0A1W2PPC1 479 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 HSD52Q0P140 79 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 HAX1O00165 279 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 GDF15Q99988 308 aa9.96□□□□□ -0.81
VPS13A-205ENST00000376636 ZFP36L2P47974 494 aaKnown RBP9.96□□□□□ -0.82
VPS13A-205ENST00000376636 SHANK1Q9Y566 2161 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 CD8AP01732 235 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 CYP2G1PQ6ZSU1 146 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 ICAM4Q14773 271 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 KIAA0040Q15053 153 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.82
VPS13A-205ENST00000376636 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 PRR32B1ATL7 298 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 LOXL4Q96JB6 756 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 ZNF479Q96JC4 524 aa9.96□□□□□ -0.82
VPS13A-205ENST00000376636 NBEAP1P0C6P0 100 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 FUT5Q11128 374 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 IRF3Q14653 427 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 ZG16O60844 167 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
VPS13A-205ENST00000376636 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 TSC2P49815 1807 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 C2CD4DB7Z1M9 353 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 MYOD1P15172 320 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 STRCP1A6NGW2 1772 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 BGLAPP02818 100 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 C1orf210Q8IVY1 113 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 ITLN2Q8WWU7 325 aaPredicted RBP9.95□□□□□ -0.82
VPS13A-205ENST00000376636 C5orf66Q9H5L9 145 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 SMPXQ9UHP9 88 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 LOC285556D6RIA3 1793 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 IGKCP01834 107 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 ST6GALNAC6Q969X2 333 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 ASCL2Q99929 193 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 SPANXCQ9NY87 97 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 TCF19Q9Y242 345 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 PPIAL4CA0A0B4J2A2 164 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 ITGB1BP1O14713 200 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 PPIAL4GP0DN37 164 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 CCL19Q99731 98 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 NDUFAF3Q9BU61 184 aa9.95□□□□□ -0.82
VPS13A-205ENST00000376636 TRAV9-2A0A087WT02 112 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 CT62P0C5K7 136 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 RPRMQ9NS64 109 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 PEMTQ9UBM1 199 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 EPDR1Q9UM22 224 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 TRAV5A0A0B4J249 113 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 MAFAQ8NHW3 353 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 ARID2Q68CP9 1835 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 IGHV3-72A0A0B4J1Y9 119 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 CHTOPQ9Y3Y2 248 aaKnown RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 TSPAN7P41732 249 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 MRPS18AQ9NVS2 196 aaKnown RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 ZP4Q12836 540 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 UCN2Q96RP3 112 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 LOC105371242A0A075B767 164 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 IL11P20809 199 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 RBMY1FQ15415 496 aaKnown RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 TMEM91Q6ZNR0 172 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 ABHD12Q8N2K0 398 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 LINC01587Q99440 93 aa9.94□□□□□ -0.82
VPS13A-205ENST00000376636 CARHSP1Q9Y2V2 147 aaKnown RBP9.94□□□□□ -0.82
VPS13A-205ENST00000376636 MOSP00540 346 aa9.93□□□□□ -0.82
VPS13A-205ENST00000376636 ESDP10768 282 aa9.93□□□□□ -0.82
VPS13A-205ENST00000376636 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-205ENST00000376636 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
VPS13A-205ENST00000376636 COL22A1Q8NFW1 1626 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-205ENST00000376636 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
VPS13A-205ENST00000376636 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms