RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PRDX2P32119 198 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 GATA4P43694 442 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 IZUMO4Q1ZYL8 232 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 FGFRL1Q8N441 504 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 IMMP2LQ96T52 175 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
HMGA1-203ENST00000374116 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
HMGA1-203ENST00000374116 IGHV4-30-2A0A087WSY4 118 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 SPINT2O43291 252 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 CEBPGP53567 150 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 HTD2P86397 168 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 TMEM241Q24JQ0 296 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 Q96MF0 132 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 FOXC2Q99958 501 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 TFF1P04155 84 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 GCSAMQ8N6F7 178 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 PPP1R35Q8TAP8 253 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 MBD3L1Q8WWY6 194 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 FAM168AQ92567 244 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
HMGA1-203ENST00000374116 YLPM1P49750 1951 aaKnown RBP11.71□□□□□ -0.53
HMGA1-203ENST00000374116 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 H3BP45 60 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 ITGB1BP1O14713 200 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.54
HMGA1-203ENST00000374116 GZMHP20718 246 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 HBG1P69891 147 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 HBG2P69892 147 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.54
HMGA1-203ENST00000374116 ARSJQ5FYB0 599 aaPredicted RBP11.71□□□□□ -0.54
HMGA1-203ENST00000374116 ZNF66Q6ZN08 573 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 TMEM106BQ9NUM4 274 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 NAT8Q9UHE5 227 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 MED13LQ71F56 2210 aa11.71□□□□□ -0.54
HMGA1-203ENST00000374116 SVEP1Q4LDE5 3571 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 SOX15O60248 233 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 P0C879 139 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 IAPPP10997 89 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 BRS3P32247 399 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RAB11AP62491 216 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
HMGA1-203ENST00000374116 CR1LQ2VPA4 569 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 SCGB1C1Q8TD33 95 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 MGST3O14880 152 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 SSTR5P35346 364 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RUNX1Q01196 453 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
HMGA1-203ENST00000374116 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
HMGA1-203ENST00000374116 TPRX1Q8N7U7 411 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 C10orf105Q8TEF2 133 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 HSD17B10Q99714 261 aaKnown RBP11.7□□□□□ -0.54
HMGA1-203ENST00000374116 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 GAB2Q9UQC2 676 aa11.7□□□□□ -0.54
HMGA1-203ENST00000374116 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
HMGA1-203ENST00000374116 RAMP3O60896 148 aa11.69□□□□□ -0.54
HMGA1-203ENST00000374116 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
HMGA1-203ENST00000374116 DEFB108BQ8NET1 73 aa11.69□□□□□ -0.54
HMGA1-203ENST00000374116 PARD6GQ9BYG4 376 aaPredicted RBP11.69□□□□□ -0.54
HMGA1-203ENST00000374116 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
HMGA1-203ENST00000374116 IGHV3OR15-7A0A075B7D8 119 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 ODAMA1E959 279 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 HRASP01112 189 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 KRASP01116 189 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 G6PCP35575 357 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
HMGA1-203ENST00000374116 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 FAM53AQ6NSI3 398 aaPredicted RBP11.68□□□□□ -0.54
HMGA1-203ENST00000374116 C16orf82Q7Z2V1 217 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 Q8TCH9 128 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
HMGA1-203ENST00000374116 PSMG3Q9BT73 122 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms