RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 DNM1P46Q6ZS02 220 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF383Q8NA42 475 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 NDUFA3O95167 84 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 SEC11BP0C7V7 166 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 PGA5P0DJD9 388 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 POC1AQ8NBT0 407 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 ALX4Q9H161 411 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-202ENST00000372216 P2RY4P51582 365 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 RTN4RL2Q86UN3 420 aa8.27□□□□□ -1.09
COL4A6-202ENST00000372216 C17orf100A8MU93 164 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 SNAI2O43623 268 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 IGHV3-53P01767 116 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 DRAM1Q8N682 238 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TRGV4A0A0C4DH28 118 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TCF21O43680 179 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 STAG3L2P0CL84 134 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 PSG7Q13046 419 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF146Q15072 292 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 UNQ6494/PRO21346Q6UXR6 183 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 C3orf56Q8N813 242 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 OR1P1Q8NH06 330 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 NPIPB3Q92617 1050 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 OR51M1Q9H341 326 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 NXT2Q9NPJ8 142 aaKnown RBP8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 GRIFINA4D1Z8 144 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 IQCF6A8MYZ5 107 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 E9PLN8 166 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 M0R143 59 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TM4SF5O14894 197 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF345Q14585 488 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 VKORC1Q9BQB6 163 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 PPP1R3EQ9H7J1 279 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 PEMTQ9UBM1 199 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TRAV40A0A0B4J280 105 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 ICAM4Q14773 271 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM252Q8N6L7 170 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 SEMA5BQ9P283 1151 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM14DPA8MWL7 114 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 CRYBB3P26998 211 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 CD300CQ08708 224 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM42Q69YG0 159 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM219Q86XT9 240 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 MESP1Q9BRJ9 268 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
COL4A6-202ENST00000372216 TRAV24A0A0B4J272 114 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 WDR82Q6UXN9 313 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 OR5AN1Q8NGI8 311 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 PARLQ9H300 379 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 DPM3Q9P2X0 92 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 TUBD1Q9UJT1 453 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 THBDP07204 575 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 SERF2P84101 59 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 BIVMQ86UB2 503 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM70Q9BUB7 260 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 CNTRLQ7Z7A1 2325 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 GGCTO75223 188 aaKnown RBP8.25□□□□□ -1.09
COL4A6-202ENST00000372216 TBX6O95947 436 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-202ENST00000372216 HKR1P10072 659 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 MRAPQ8TCY5 172 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 TCF19Q9Y242 345 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF585BQ52M93 769 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 H1FOOQ8IZA3 346 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-202ENST00000372216 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-202ENST00000372216 C5orf66Q9H5L9 145 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 CD200R1LQ6Q8B3 271 aa8.25□□□□□ -1.09
COL4A6-202ENST00000372216 TRAV21A0A0B4J279 112 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 CD7P09564 240 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 OR13A1Q8NGR1 328 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 DNAJC4Q9NNZ3 241 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM187Q14656 261 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 LURAP1LQ8IV03 231 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 ARPC1AQ92747 370 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 SCN2AQ99250 2005 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 IGHV1-18A0A0C4DH31 117 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 C12orf77C9JDV5 145 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 IGHV4-39P01824 125 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 RPS11P62280 158 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL4A6-202ENST00000372216 HSPB9Q9BQS6 159 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
COL4A6-202ENST00000372216 ASIPP42127 132 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 COX19Q49B96 90 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF385CQ66K41 422 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-202ENST00000372216 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 TAF15Q92804 592 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL4A6-202ENST00000372216 RARRES2Q99969 163 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 GREB1Q4ZG55 1949 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 KBTBD11-OT1A0A1B0GTJ5 212 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 BCL2P10415 239 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 EGR1P18146 543 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms