RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SSBP3Q9BWW4 388 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 MRPL32Q9BYC8 188 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HILPDAQ9Y5L2 63 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM215AQ9Y5M1 114 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 MUC6Q6W4X9 2439 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 MED13Q9UHV7 2174 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 COL6A6A6NMZ7 2263 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 IGKV1D-17A0A075B6S4 117 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 LOC102723971A0A1B0GUV8 181 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 C20orf202A1L168 122 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 DPRXA6NFQ7 191 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF785A8K8V0 405 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 UPK2O00526 184 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CHEK1O14757 476 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RAMP3O60896 148 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CA2P00918 260 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H1BP16401 226 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 EGR1P18146 543 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 WT1P19544 449 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ADIPOQQ15848 244 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RPEL1Q2QD12 228 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 WDR73Q6P4I2 378 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 BLNKQ8WV28 456 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 GRAMD2BQ96HH9 432 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PAXXQ9BUH6 204 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM133Q9H2Q1 129 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 KLF2Q9Y5W3 355 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PKDREJQ9NTG1 2253 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 CADP27708 2225 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TRAV30A0A087WSZ9 112 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 CCL3L1P16619 93 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 NTF3P20783 257 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TAS2R60P59551 318 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 RANP62826 216 aaKnown RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 C20orf204Q6ZNR8 217 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF788Q6ZQV5 615 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 SSX7Q7RTT5 188 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 C16orf82Q7Z2V1 217 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 OR1P1Q8NH06 330 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 Q8TCH9 128 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM222BQ8WU58 562 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 HS3ST6Q96QI5 342 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 DNAJC4Q9NNZ3 241 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TNFRSF19Q9NS68 423 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 HIGD1AQ9Y241 93 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 GTF3C1Q12789 2109 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 UTRNP46939 3433 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 IGLV3-9A0A075B6K5 115 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 IGKV1-6A0A0C4DH72 117 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 M0QZ24 198 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 GOSR1O95249 250 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 C8orf88P0DMB2 117 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 COX6B1P14854 86 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 MAS1LP35410 378 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 PPOXP50336 477 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 RND2P52198 227 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 SUMO1P63165 101 aaKnown RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 PAX5Q02548 391 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 MST1LQ2TV78 715 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 CYB5R2Q6BCY4 276 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 SPNS3Q6ZMD2 512 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF439Q8NDP4 499 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 RNASEH2CQ8TDP1 164 aaKnown RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF257Q9Y2Q1 563 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 C9JQL5 133 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 ATXN7O15265 892 aaPredicted RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 IGKV1-5P01602 117 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TFF1P04155 84 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM11P17152 192 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 PYY3Q5JQD4 70 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 Q6ZR03 302 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 STPG3Q8N7X2 389 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 BSCL2Q96G97 398 aaPredicted RBP4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 TPPP3Q9BW30 176 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 METRNQ9UJH8 293 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 DOCK10Q96BY6 2186 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 ZGRF1Q86YA3 2104 aa4.41□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BKO60814 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BJP06899 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 SRP19P09132 144 aaKnown RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BOP23527 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BBP33778 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 GPX4P36969 197 aaPredicted RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BDP58876 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BCP62807 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF124Q15973 351 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST2H2BEQ16778 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM183BQ1AE95 376 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HCP5Q6MZN7 132 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 WDR86Q86TI4 376 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 ZCCHC24Q8N2G6 241 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms