RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 LINC01587Q99440 93 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 IGHV4-61A0A0C4DH41 118 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 FCGR2BP31994 310 aaPredicted RBP6.8□□□□□ -1.32
SSR2-202ENST00000368311 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 FAM219BQ5XKK7 198 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 CD200R1LQ6Q8B3 271 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 ASCL4Q6XD76 172 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 C19orf35Q6ZS72 473 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 EIF4E3Q8N5X7 224 aaKnown RBP6.8□□□□□ -1.32
SSR2-202ENST00000368311 TMEM101Q96IK0 257 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 NXF2Q9GZY0 626 aaKnown RBP6.8□□□□□ -1.32
SSR2-202ENST00000368311 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
SSR2-202ENST00000368311 YTHDF2Q9Y5A9 579 aaKnown RBP6.8□□□□□ -1.32
SSR2-202ENST00000368311 CEP290O15078 2479 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 CACNA1IQ9P0X4 2223 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 MSGN1A6NI15 193 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 RAB5AP20339 215 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 PPIFP30405 207 aaKnown RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 FAM201AQ5SY85 155 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 CYP2G1PQ6ZSU1 146 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 GBGT1Q8N5D6 347 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 COL8A1P27658 744 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 HCP5Q6MZN7 132 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 Q6ZN92 141 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 MBNL3Q9NUK0 354 aaKnown RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 CTXND1A0A1B0GTU2 59 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 NPIPB5A8MRT5 1133 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 ADAM10O14672 748 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 CXCL2P19875 107 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 RELBQ01201 579 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 CD177Q8N6Q3 437 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 OR5H6Q8NGV6 325 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 SEC22AQ96IW7 307 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 PPIL3Q9H2H8 161 aaKnown RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 PNRC2Q9NPJ4 139 aaKnown RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 TIMM8BQ9Y5J9 83 aaPredicted RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 BCL2L11O43521 198 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 LY6G6DO95868 133 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 IL4P05112 153 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
SSR2-202ENST00000368311 DEFB112Q30KQ8 113 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
SSR2-202ENST00000368311 MPTX1A8MV57 137 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 GATCO43716 136 aaKnown RBP6.78□□□□□ -1.32
SSR2-202ENST00000368311 LGALS1P09382 135 aaKnown RBP6.78□□□□□ -1.32
SSR2-202ENST00000368311 RANP62826 216 aaKnown RBP6.78□□□□□ -1.32
SSR2-202ENST00000368311 DEFA5Q01523 94 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 C11orf87Q6NUJ2 197 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 WDR73Q6P4I2 378 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 DHRS11Q6UWP2 260 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 CLEC18BQ6UXF7 455 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 SELENOHQ8IZQ5 122 aaKnown RBP6.78□□□□□ -1.32
SSR2-202ENST00000368311 C10orf111Q8N326 155 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 FAM89BQ8N5H3 189 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 SLC25A38Q96DW6 304 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 RBKSQ9H477 322 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 NPDC1Q9NQX5 325 aaPredicted RBP6.78□□□□□ -1.32
SSR2-202ENST00000368311 FANCMQ8IYD8 2048 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 SMIM18P0DKX4 95 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 FCER1GP30273 86 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 GUSBP1Q15486 140 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 OR5C1Q8NGR4 320 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 FNDC10F2Z333 226 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 NDUFA4O00483 81 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 MLNRO43193 412 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 CRLF1O75462 422 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 C8orf88P0DMB2 117 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 LYZL4Q96KX0 146 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 CRYBA2P53672 197 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 PHYHIPLQ96FC7 376 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 TNFSF18Q9UNG2 199 aa6.78□□□□□ -1.32
SSR2-202ENST00000368311 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 H0YJW9 148 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 CD74P04233 296 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 GRNP28799 593 aaKnown RBP6.77□□□□□ -1.33
SSR2-202ENST00000368311 PPP1R1AQ13522 171 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 TEX261Q6UWH6 196 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 SIGLEC15Q6ZMC9 328 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 MYPOPQ86VE0 399 aaPredicted RBP6.77□□□□□ -1.33
SSR2-202ENST00000368311 IGKV1D-17A0A075B6S4 117 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 P01737 135 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 SUPT4H1P63272 117 aaKnown RBP6.77□□□□□ -1.33
SSR2-202ENST00000368311 HIST1H1AQ02539 215 aaPredicted RBP6.77□□□□□ -1.33
SSR2-202ENST00000368311 MST1LQ2TV78 715 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 RPL39P5Q59GN2 51 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 C1orf194Q5T5A4 169 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 TCF24Q7RTU0 167 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 STPG2Q8N412 459 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 FGFBP3Q8TAT2 258 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 MAP1LC3B2A6NCE7 125 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
SSR2-202ENST00000368311 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 C4orf3Q8WVX3 66 aa6.77□□□□□ -1.33
SSR2-202ENST00000368311 MAP1LC3BQ9GZQ8 125 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms