RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 OR5AC1P0C628 307 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 MECP2P51608 486 aaKnown RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 AKR1C2P52895 323 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 ATP5G2Q06055 141 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 KLF9Q13886 244 aaPredicted RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 CCDC71LQ8N9Z2 235 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 FANCD2OSQ96PS1 177 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 PRR25Q96S07 402 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 B9D2Q9BPU9 175 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 AIFM2Q9BRQ8 373 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 RTBDNQ9BSG5 229 aaPredicted RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 C5orf66Q9H5L9 145 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 RABL2AQ9UBK7 228 aaPredicted RBP11.25□□□□□ -0.61
SF3B5-201ENST00000367569 FBXL7Q9UJT9 491 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 RABL2BQ9UNT1 228 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
SF3B5-201ENST00000367569 TRBV9A0A0B4J1U6 114 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 A0A0G2JLM5 398 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 A0A0G2JRQ6 117 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 MFSD2BA6NFX1 497 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 SNAPC5O75971 98 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 DEFA4P12838 97 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 CTRB1P17538 263 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 ECI1P42126 302 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 SYNJ2BPP57105 145 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 CTRB2Q6GPI1 263 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 OR6Q1Q8NGQ2 317 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 RNASE11Q8TAA1 199 aaKnown RBP11.24□□□□□ -0.61
SF3B5-201ENST00000367569 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 PRRT1Q99946 306 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
SF3B5-201ENST00000367569 SELENOKQ9Y6D0 94 aa11.24□□□□□ -0.61
SF3B5-201ENST00000367569 TEX13DA0A0J9YY54 714 aaPredicted RBP11.23□□□□□ -0.61
SF3B5-201ENST00000367569 BMPR1BO00238 502 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 LY86O95711 162 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 TRAPPC2P0DI81 140 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 TRAPPC2BP0DI82 140 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 EDN2P20800 178 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 SPANXN2Q5MJ10 180 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 ZNF57Q68EA5 555 aaPredicted RBP11.23□□□□□ -0.61
SF3B5-201ENST00000367569 SLC25A42Q86VD7 318 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 OR1L8Q8NGR8 309 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 LHFPL5Q8TAF8 219 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 SRRQ9GZT4 340 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
SF3B5-201ENST00000367569 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 NXPH3O95157 252 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 CRYGCP07315 174 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 MFAP2P55001 183 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 RPEL1Q2QD12 228 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 USMG5Q96IX5 58 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 RANGRFQ9HD47 186 aaPredicted RBP11.22□□□□□ -0.61
SF3B5-201ENST00000367569 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 PRNDQ9UKY0 176 aa11.22□□□□□ -0.61
SF3B5-201ENST00000367569 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 BRI3O95415 125 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 AKR1C4P17516 323 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 UCP1P25874 307 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 PTBP1P26599 531 aaKnown RBP eCLIP11.21□□□□□ -0.61
SF3B5-201ENST00000367569 BAK1Q16611 211 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 TMED4Q7Z7H5 227 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 GDPD1Q8N9F7 314 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 LSM10Q969L4 123 aaKnown RBP11.21□□□□□ -0.61
SF3B5-201ENST00000367569 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 SLC2A8Q9NY64 477 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 SCP2D1Q9UJQ7 156 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 GPR132Q9UNW8 380 aa11.21□□□□□ -0.61
SF3B5-201ENST00000367569 HUWE1Q7Z6Z7 4374 aaKnown RBP11.21□□□□□ -0.62
SF3B5-201ENST00000367569 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 DHFRP00374 187 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 ZP3P21754 424 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 GPR183P32249 361 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
SF3B5-201ENST00000367569 TMEM268Q5VZI3 342 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 ACSM6Q6P461 480 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 WWC2-AS2Q96NR7 200 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
SF3B5-201ENST00000367569 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
SF3B5-201ENST00000367569 FAM212BQ9NTI7 297 aaPredicted RBP11.2□□□□□ -0.62
SF3B5-201ENST00000367569 ZMAT5Q9UDW3 170 aaKnown RBP11.2□□□□□ -0.62
SF3B5-201ENST00000367569 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms