RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 VAMP3Q15836 100 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 SSX8Q7RTT4 187 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 TMEM156Q8N614 296 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 CCDC12Q8WUD4 166 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 TMEM239Q8WW34 195 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 FAM210AQ96ND0 272 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 TMEM109Q9BVC6 243 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 RASL12Q9NYN1 266 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 CASP8AP2Q9UKL3 1982 aa-1.73□□□□□ -2.69
RNU4-40P-201ENST00000364351 KCNK1O00180 336 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 COX7A2LO14548 114 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 NOS1APO75052 506 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 ZNF682O95780 498 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 SPRR2DP22532 72 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 CSN1S1P47710 185 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 TMEM251Q8N6I4 163 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 OR4D11Q8NGI4 311 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 ANKRD7Q92527 254 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 SMIM12Q96EX1 92 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 PRELID1Q9Y255 219 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 POLQO75417 2590 aa-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 FLNBO75369 2602 aaKnown RBP-1.74□□□□□ -2.69
RNU4-40P-201ENST00000364351 KDM6BO15054 1643 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 CCL25O15444 150 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 IGHV3-7P01780 117 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 NQO2P16083 231 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 HPCAP84074 193 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 OR4D1Q15615 310 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 TBC1D19Q8N5T2 526 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 AGR3Q8TD06 166 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 C11orf40Q8WZ69 217 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 DCSTAMPQ9H295 470 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 PARVAQ9NVD7 372 aa-1.75□□□□□ -2.69
RNU4-40P-201ENST00000364351 A0A1B0GW15 77 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 FABP5Q01469 135 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 CCL13Q99616 98 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 TAS2R4Q9NYW5 299 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 TTC41PQ6P2S7 1318 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 USP9YO00507 2555 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 DOCK3Q8IZD9 2030 aa-1.76□□□□□ -2.69
RNU4-40P-201ENST00000364351 CELSR2Q9HCU4 2923 aa-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 SFTPCP11686 197 aa-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 ZNF80P51504 273 aaPredicted RBP-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 TEX261Q6UWH6 196 aa-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 U3KQ87 197 aa-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 TEP1Q99973 2627 aaKnown RBP-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 CCDC88AQ3V6T2 1871 aa-1.77□□□□□ -2.69
RNU4-40P-201ENST00000364351 LAMA2P24043 3122 aaKnown RBP-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 GGT3PA6NGU5 568 aa-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 KRT7P08729 469 aa-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 RAB13P51153 203 aa-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 FOXA3P55318 350 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 GNPNAT1Q96EK6 184 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 KIAA0232Q92628 1395 aa-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 ITPR3Q14573 2671 aa-1.78□□□□□ -2.69
RNU4-40P-201ENST00000364351 ZDBF2Q9HCK1 2354 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 KIF27Q86VH2 1401 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 ZNF736B4DX44 427 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 RPS4Y1P22090 263 aaKnown RBP-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 FXYD6P3P58550 94 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 LINC00322Q6ZN03 302 aaPredicted RBP-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 ATOH7Q8N100 152 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 CFAP45Q9UL16 551 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 HECTD1Q9ULT8 2610 aa-1.79□□□□□ -2.7
RNU4-40P-201ENST00000364351 CACNA1HO95180 2353 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 CCDC160A6NGH7 325 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 CTSDP07339 412 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 SPI1P17947 270 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 CD40LGP29965 261 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 S100A7P31151 101 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 DLX6P56179 175 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 RAB8AP61006 207 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 PLPP5Q8NEB5 264 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 PXT1Q8NFP0 134 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 SFT2D1Q8WV19 159 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 TMEM106AQ96A25 262 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 MED10Q9BTT4 135 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 SPACA1Q9HBV2 294 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 RABL2BQ9UNT1 228 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 MXRA5Q9NR99 2828 aa-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 HUWE1Q7Z6Z7 4374 aaKnown RBP-1.8□□□□□ -2.7
RNU4-40P-201ENST00000364351 MAP1BP46821 2468 aaKnown RBP-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 TRAV1-1A0A0B4J248 108 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 I3L521 148 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 YEATS4O95619 227 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 LDOC1O95751 146 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 LINC00614P0C842 121 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 SSR2P43308 183 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 HLA-DRB3P79483 266 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 RHOGP84095 191 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 IBA57Q5T440 356 aaKnown RBP-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 Q6ZQT0 140 aa-1.81□□□□□ -2.7
RNU4-40P-201ENST00000364351 TGP01266 2768 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 GOLGA6L7A0A1B0GV03 622 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 H0YIV9 168 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 KLF7O75840 302 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 CD151P48509 253 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 C1orf137Q5JT78 98 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 SPANXN5Q5MJ07 72 aa-1.82□□□□□ -2.7
RNU4-40P-201ENST00000364351 SBSNQ6UWP8 590 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms