RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IGFBP2P18065 325 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 WDR82Q6UXN9 313 aa15.2■□□□□ 0.02
COL18A1-202ENST00000355480 PSMG3Q9BT73 122 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-202ENST00000355480 CSRP1P21291 193 aaKnown RBP15.2■□□□□ 0.02
COL18A1-202ENST00000355480 IQCF6A8MYZ5 107 aa15.19■□□□□ 0.02
COL18A1-202ENST00000355480 EMP1P54849 157 aa15.19■□□□□ 0.02
COL18A1-202ENST00000355480 REPIN1Q9BWE0 567 aaKnown RBP15.19■□□□□ 0.02
COL18A1-202ENST00000355480 COL11A1P12107 1806 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-202ENST00000355480 HBBP68871 147 aa15.19■□□□□ 0.02
COL18A1-202ENST00000355480 GAGE10A6NGK3 116 aa15.19■□□□□ 0.02
COL18A1-202ENST00000355480 C12orf54Q6X4T0 127 aa15.19■□□□□ 0.02
COL18A1-202ENST00000355480 MRPS18CQ9Y3D5 142 aaKnown RBP15.19■□□□□ 0.02
COL18A1-202ENST00000355480 LHX2P50458 406 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 COLCA1Q6ZS62 124 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 FAM90A1Q86YD7 464 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 SEMA5BQ9P283 1151 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 SLC25A34Q6PIV7 304 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 LINC01587Q99440 93 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 CBLN4Q9NTU7 201 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 TCF21O43680 179 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 PRB3Q04118 309 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-202ENST00000355480 MARVELD3Q96A59 401 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 PEMTQ9UBM1 199 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 CGAP01215 116 aa15.18■□□□□ 0.02
COL18A1-202ENST00000355480 GRIFINA4D1Z8 144 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 CCL3L1P16619 93 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 GPX4P36969 197 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-202ENST00000355480 LY6DQ14210 128 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 NPFFR1Q9GZQ6 430 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 TRBV9A0A0B4J1U6 114 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 MSGN1A6NI15 193 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 JOSD1Q15040 202 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-202ENST00000355480 GGACTQ9BVM4 153 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 TMEM170BQ5T4T1 132 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 BIVMQ86UB2 503 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 WNT10AQ9GZT5 417 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-202ENST00000355480 A0A0G2JK05 382 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 TFF3Q07654 80 aa15.17■□□□□ 0.02
COL18A1-202ENST00000355480 CSRP3P50461 194 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 CXorf65A6NEN9 183 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 VDAC2P45880 294 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-202ENST00000355480 ALKBH7Q9BT30 221 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-202ENST00000355480 RPRMQ9NS64 109 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 ZNF385CQ66K41 422 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-202ENST00000355480 OR52E5Q8NH55 327 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 RCC1LQ96I51 464 aaKnown RBP15.16■□□□□ 0.02
COL18A1-202ENST00000355480 DMRTA2Q96SC8 542 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 RNASE4P34096 147 aaKnown RBP15.16■□□□□ 0.02
COL18A1-202ENST00000355480 COTL1Q14019 142 aa15.16■□□□□ 0.02
COL18A1-202ENST00000355480 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-202ENST00000355480 Q5BKY6 102 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 OR11H4Q8NGC9 324 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 BEX4Q9NWD9 120 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-202ENST00000355480 TMEM160Q9NX00 188 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 UQCR10Q9UDW1 63 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 TRGV2A0A075B6R0 118 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 MUC21A0A0G2JKD1 596 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 MUC21A0A140T8X8 626 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 MUC21Q5SSG8 566 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 FOXA3P55318 350 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-202ENST00000355480 SPACA3Q8IXA5 215 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 AICDAQ9GZX7 198 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 NBR2O15453 112 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 REC114Q7Z4M0 266 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 WFIKKN1Q96NZ8 548 aa15.15■□□□□ 0.02
COL18A1-202ENST00000355480 IGLV3-12A0A075B6K2 115 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 K7ERU9 68 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 PEX7O00628 323 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 UCP1P25874 307 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 ATOH7Q8N100 152 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 DNAL4O96015 105 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 ZCCHC24Q8N2G6 241 aaKnown RBP15.14■□□□□ 0.01
COL18A1-202ENST00000355480 PRELID3AQ96N28 172 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 C18orf15Q96N68 181 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 JMJD8Q96S16 334 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
COL18A1-202ENST00000355480 PQLC2LA1A4F0 135 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 TMEM250H0YL14 139 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 THBDP07204 575 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 RNASEH2CQ8TDP1 164 aaKnown RBP15.13■□□□□ 0.01
COL18A1-202ENST00000355480 PRSS22Q9GZN4 317 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 SOD3P08294 240 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 CBLN1P23435 193 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 PLSCR2Q9NRY7 297 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 PLPPR1Q8TBJ4 325 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 LOC102723996A0A087X1L8 192 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 OR11H12B2RN74 326 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 SAA1P0DJI8 122 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-202ENST00000355480 LAIR2Q6ISS4 152 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 OR11H1Q8NG94 326 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 OR11H2Q8NH07 326 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 SAA2-SAA4A0A096LPE2 208 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 LYNX1G3V0Z9 82 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 SAA2P0DJI9 122 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-202ENST00000355480 LYNX1P0DP58 116 aa15.13■□□□□ 0.01
COL18A1-202ENST00000355480 PLP1P60201 277 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 C2orf88Q9BSF0 95 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 SDF2L1Q9HCN8 221 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 DEPPQ9NTK1 212 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms