RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CA2P00918 260 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 TFF3Q07654 80 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 DHRS13Q6UX07 377 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 A0A087X0K7 114 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 TAX1BP3O14907 124 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 HAND1O96004 215 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 CLEC3BP05452 202 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 ARR3P36575 388 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 CEACAM3P40198 252 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 ZNF808Q8N4W9 903 aaPredicted RBP7.83□□□□□ -1.16
SMG6-202ENST00000354901 Q8N976 141 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 PLPPR2Q96GM1 343 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 GMPPAQ96IJ6 420 aaPredicted RBP7.83□□□□□ -1.16
SMG6-202ENST00000354901 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 A0A1W2PS18 150 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 VSTM5A8MXK1 200 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 H0Y980 276 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 M0R2Z0 102 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 SYNGR2O43760 224 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 LYZL6O75951 148 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 TMEM164Q5U3C3 297 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 ZNF324BQ6AW86 544 aaPredicted RBP7.83□□□□□ -1.16
SMG6-202ENST00000354901 NEUROG1Q92886 237 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 PTPRZ1P23471 2315 aaPredicted RBP7.82□□□□□ -1.16
SMG6-202ENST00000354901 TRAV26-1A0A087WT03 109 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 IGKV1-39P01597 117 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 IGKV1D-39P04432 117 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 ZNF826PQ6ZT77 177 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 OR10P1Q8NGE3 313 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 LINC00470Q9BZP3 86 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 GP6Q9HCN6 339 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FZR1Q9UM11 496 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 CFAP47Q6ZTR5 3102 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 IGHV2-26A0A0B4J1V2 119 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 A0A1W2PPV4 95 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A10PA6NDY2 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A18PA6NE21 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A16PA6NEW6 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A20PA6NIJ5 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A8PA6NJQ4 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A7PA6NKC0 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A22PA8MWA6 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A12PA8MX19 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A5PA8MXJ8 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A23PA8MXZ1 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 ZNF324O75467 553 aaPredicted RBP7.82□□□□□ -1.16
SMG6-202ENST00000354901 S1PR2O95136 353 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 OR2H2O95918 312 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A15PP0C7V4 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A13PP0C7W8 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A14PP0C7W9 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FAM90A24PP0C7X0 464 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 TMEM95Q3KNT9 176 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 TPRX1Q8N7U7 411 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 FER1L6-AS1Q8NA97 138 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 ZNF48Q96MX3 618 aaPredicted RBP7.82□□□□□ -1.16
SMG6-202ENST00000354901 AGMATQ9BSE5 352 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 CTXND1A0A1B0GTU2 59 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 CD59P13987 128 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 RAB9AP51151 201 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 LTC4SQ16873 150 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 OCC1Q8TAD7 63 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 KCNS1Q96KK3 526 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 HILPDAQ9Y5L2 63 aa7.82□□□□□ -1.16
SMG6-202ENST00000354901 SH2D7A6NKC9 451 aaPredicted RBP7.81□□□□□ -1.16
SMG6-202ENST00000354901 SLC25A6P12236 298 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 CRYBA4P53673 196 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 LINC00205P59089 165 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 ZNF816Q0VGE8 651 aaPredicted RBP7.81□□□□□ -1.16
SMG6-202ENST00000354901 LRRC75BQ2VPJ9 315 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 RNFT1Q5M7Z0 435 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 PRAMEF5Q5TYX0 476 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 PRAMEF6Q5VXH4 476 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 WDR86Q86TI4 376 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 ZNF295-AS1Q8N0V1 137 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 SCCPDHQ8NBX0 429 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
SMG6-202ENST00000354901 WNT9BO14905 357 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 CLDN14O95500 239 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 IGKV1-5P01602 117 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
SMG6-202ENST00000354901 ARG2P78540 354 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 TMEM144Q7Z5S9 345 aa7.81□□□□□ -1.16
SMG6-202ENST00000354901 INTS1Q8N201 2190 aaKnown RBP7.81□□□□□ -1.16
SMG6-202ENST00000354901 CA1P00915 261 aaPredicted RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 GPR6P46095 362 aaPredicted RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 CKS1BP61024 79 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 PAX2Q02962 417 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 RFESDQ8TAC1 157 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 OR8B2Q96RD0 313 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 MRPS16Q9Y3D3 137 aaKnown RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 MPC1Q9Y5U8 109 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 RIF1Q5UIP0 2472 aaKnown RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 IGHV3-43A0A0B4J1X8 118 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 J3QT63 122 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 WISP2O76076 250 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 TNFSF15O95150 251 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 CNIH1O95406 144 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 SP1P08047 785 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms