RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IGFL3Q6UXB1 125 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 GAR1Q9NY12 217 aaKnown RBP11.41□□□□□ -0.58
SMC6-201ENST00000351948 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 IGKV3-15P01624 115 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 SELENOTP62341 195 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 SIGIRRQ6IA17 410 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 FBLN5Q9UBX5 448 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.58
SMC6-201ENST00000351948 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 GALNT14Q96FL9 552 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 DCAF16Q9NXF7 216 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 TIMM23O14925 209 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 OTX1P32242 354 aaPredicted RBP11.4□□□□□ -0.58
SMC6-201ENST00000351948 BRD3OSQ6XYD6 125 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 NIT2Q9NQR4 276 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
SMC6-201ENST00000351948 FAM215AQ9Y5M1 114 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 BMPR1BO00238 502 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 FA2HQ7L5A8 372 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 RARRES2Q99969 163 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.58
SMC6-201ENST00000351948 UQCRFS1P47985 274 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 EFNA4P52798 201 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 STPG3Q8N7X2 389 aa11.4□□□□□ -0.58
SMC6-201ENST00000351948 MPDU1O75352 247 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 S100A8P05109 93 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 GPR183P32249 361 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 PRB1P04280 392 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 TFF3Q07654 80 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 BPIFA4PQ86YQ2 179 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 CCDC168Q8NDH2 2452 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 FBXL7Q9UJT9 491 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 YPEL1O60688 119 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
SMC6-201ENST00000351948 TMEM200BQ69YZ2 307 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 TMEM219Q86XT9 240 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
SMC6-201ENST00000351948 YPEL2Q96QA6 119 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 SELENOKQ9Y6D0 94 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
SMC6-201ENST00000351948 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 ETV2O00321 342 aaPredicted RBP11.39□□□□□ -0.59
SMC6-201ENST00000351948 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 ZNF735P0CB33 412 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 IGFBP2P18065 325 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 NCMAPQ5T1S8 102 aa11.39□□□□□ -0.59
SMC6-201ENST00000351948 LRRK1Q38SD2 2015 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 PDE6DO43924 150 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 PPP1R27Q86WC6 154 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 BPESC1Q9GZL8 116 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 PCNTO95613 3336 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 FCER1GP30273 86 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 LRRC75BQ2VPJ9 315 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 HLA-DRB5Q30154 266 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 ARPC1AQ92747 370 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 ARL2-SNX15V9GYD0 113 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 CD55P08174 381 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 HIST1H1BP16401 226 aaKnown RBP11.38□□□□□ -0.59
SMC6-201ENST00000351948 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 WDR25Q64LD2 544 aaPredicted RBP11.38□□□□□ -0.59
SMC6-201ENST00000351948 ZNF324BQ6AW86 544 aaPredicted RBP11.38□□□□□ -0.59
SMC6-201ENST00000351948 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 PCDH15Q96QU1 1955 aa11.38□□□□□ -0.59
SMC6-201ENST00000351948 HIST1H1EP10412 219 aaKnown RBP11.38□□□□□ -0.59
SMC6-201ENST00000351948 IGKV1D-17A0A075B6S4 117 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 RPL30P62888 115 aaKnown RBP11.37□□□□□ -0.59
SMC6-201ENST00000351948 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
SMC6-201ENST00000351948 AMY1AP04745 511 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 DLX1P56177 255 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 MGPP08493 103 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 GRNP28799 593 aaKnown RBP11.37□□□□□ -0.59
SMC6-201ENST00000351948 ID1P41134 155 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 RND3P61587 244 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 TMEM42Q69YG0 159 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 GBGT1Q8N5D6 347 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
SMC6-201ENST00000351948 CD81P60033 236 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 WNT10AQ9GZT5 417 aa11.37□□□□□ -0.59
SMC6-201ENST00000351948 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 CRYBB3P26998 211 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms