RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 AURKAIP1Q9NWT8 199 aaPredicted RBP17■□□□□ 0.31
SNX3-202ENST00000349379 NSG2Q9Y328 171 aa17■□□□□ 0.31
SNX3-202ENST00000349379 C15orf61A6NNL5 157 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 B3GALNT1O75752 331 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 SNAPC5O75971 98 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 PRB2P02812 416 aaPredicted RBP16.99■□□□□ 0.31
SNX3-202ENST00000349379 SERPINE2P07093 398 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 P0C879 139 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 HOXD3P31249 432 aaPredicted RBP16.99■□□□□ 0.31
SNX3-202ENST00000349379 SPANXN2Q5MJ10 180 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 OR1L8Q8NGR8 309 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 SCP2D1Q9UJQ7 156 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 PRNDQ9UKY0 176 aa16.99■□□□□ 0.31
SNX3-202ENST00000349379 C14orf166Q9Y224 244 aaKnown RBP16.99■□□□□ 0.31
SNX3-202ENST00000349379 DBX1A6NMT0 343 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 SEC14L6B5MCN3 397 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 OVOL1O14753 267 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 OR2J3O76001 311 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 TRAPPC2P0DI81 140 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 TRAPPC2BP0DI82 140 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 HSD17B13Q7Z5P4 300 aaPredicted RBP16.98■□□□□ 0.31
SNX3-202ENST00000349379 OR10W1Q8NGF6 305 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 OR5B3Q8NH48 314 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 DEDD2Q8WXF8 326 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 PEF1Q9UBV8 284 aaKnown RBP16.98■□□□□ 0.31
SNX3-202ENST00000349379 OR51B2Q9Y5P1 312 aa16.98■□□□□ 0.31
SNX3-202ENST00000349379 IGLV11-55A0A075B6I3 123 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 DHFRP00374 187 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 IGKV1-5P01602 117 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 TRBV12-3P01733 135 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 REG1AP05451 166 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 ZP3P21754 424 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 AP3S2P59780 193 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 ATP5G2Q06055 141 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 WT1-ASQ06250 92 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 EXOSC2Q13868 293 aaKnown RBP16.97■□□□□ 0.31
SNX3-202ENST00000349379 H2BFWTQ7Z2G1 175 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 NAA60Q9H7X0 242 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 FKBP11Q9NYL4 201 aa16.97■□□□□ 0.31
SNX3-202ENST00000349379 ANKRD34BA5PLL1 514 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 CRYM-AS1A6NIL9 109 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 HIST1H1BP16401 226 aaKnown RBP16.96■□□□□ 0.31
SNX3-202ENST00000349379 C15orf32Q32M92 178 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 SP6Q3SY56 376 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 TOMM5Q8N4H5 51 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 MCUBQ9NWR8 336 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 FBXL7Q9UJT9 491 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 DMRT1Q9Y5R6 373 aa16.96■□□□□ 0.31
SNX3-202ENST00000349379 SORL1Q92673 2214 aa16.96■□□□□ 0.3
SNX3-202ENST00000349379 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.95■□□□□ 0.3
SNX3-202ENST00000349379 NDUFB8O95169 186 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 OR5AC1P0C628 307 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 FAUP35544 74 aaKnown RBP16.95■□□□□ 0.3
SNX3-202ENST00000349379 INSL3P51460 131 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 GLYATL2Q8WU03 294 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 LSM10Q969L4 123 aaKnown RBP16.95■□□□□ 0.3
SNX3-202ENST00000349379 TMEM230Q96A57 120 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 SCGB3A2Q96PL1 93 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 TMEM222Q9H0R3 208 aa16.95■□□□□ 0.3
SNX3-202ENST00000349379 CDS2O95674 445 aa16.94■□□□□ 0.3
SNX3-202ENST00000349379 KLF5Q13887 457 aaPredicted RBP16.94■□□□□ 0.3
SNX3-202ENST00000349379 FAM209BQ5JX69 171 aa16.94■□□□□ 0.3
SNX3-202ENST00000349379 ACSM6Q6P461 480 aa16.94■□□□□ 0.3
SNX3-202ENST00000349379 SDHCQ99643 169 aaPredicted RBP16.94■□□□□ 0.3
SNX3-202ENST00000349379 TEX13DA0A0J9YY54 714 aaPredicted RBP16.93■□□□□ 0.3
SNX3-202ENST00000349379 ATG12O94817 140 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 OR13C7P0DN81 318 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 IZUMO4Q1ZYL8 232 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 TRIM16LQ309B1 348 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 ZNF429Q86V71 674 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 OR4A16Q8NH70 328 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 LHFPL5Q8TAF8 219 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 GALNT14Q96FL9 552 aa16.93■□□□□ 0.3
SNX3-202ENST00000349379 BMPR1BO00238 502 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 DEFA4P12838 97 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 AKR1C2P52895 323 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 DHODHQ02127 395 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 BAK1Q16611 211 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 CCDC140Q96MF4 163 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 TMEM56Q96MV1 263 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 HINT2Q9BX68 163 aa16.92■□□□□ 0.3
SNX3-202ENST00000349379 ZMAT5Q9UDW3 170 aaKnown RBP16.92■□□□□ 0.3
SNX3-202ENST00000349379 A0A0B4J293 547 aa16.91■□□□□ 0.3
SNX3-202ENST00000349379 A0A0G2JRQ6 117 aa16.91■□□□□ 0.3
SNX3-202ENST00000349379 WI2-2373I1.2A0A1W2PRP0 233 aa16.91■□□□□ 0.3
SNX3-202ENST00000349379 MFAP2P55001 183 aa16.91■□□□□ 0.3
SNX3-202ENST00000349379 HSPE1P61604 102 aaKnown RBP16.91■□□□□ 0.3
SNX3-202ENST00000349379 PRCDQ00LT1 54 aa16.91■□□□□ 0.3
SNX3-202ENST00000349379 F11RQ9Y624 299 aaKnown RBP16.91■□□□□ 0.3
SNX3-202ENST00000349379 A6NHS1 94 aa16.9■□□□□ 0.3
SNX3-202ENST00000349379 K7EIL1 84 aa16.9■□□□□ 0.3
SNX3-202ENST00000349379 SUPT4H1P63272 117 aaKnown RBP16.9■□□□□ 0.3
SNX3-202ENST00000349379 SGPP2Q8IWX5 399 aa16.9■□□□□ 0.3
SNX3-202ENST00000349379 SELENOHQ8IZQ5 122 aaKnown RBP16.9■□□□□ 0.3
SNX3-202ENST00000349379 RBPMSQ93062 196 aaKnown RBP16.9■□□□□ 0.3
SNX3-202ENST00000349379 TMEM56-RWDD3S4R434 201 aa16.9■□□□□ 0.3
SNX3-202ENST00000349379 MFSD2BA6NFX1 497 aa16.89■□□□□ 0.29
SNX3-202ENST00000349379 TMEM187Q14656 261 aa16.89■□□□□ 0.29
SNX3-202ENST00000349379 RPEL1Q2QD12 228 aa16.89■□□□□ 0.29
SNX3-202ENST00000349379 AARDQ4LEZ3 155 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms