RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 DCTN5Q9BTE1 182 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 HIGD1AQ9Y241 93 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 KIAA1549LQ6ZVL6 1849 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 LY6G6EA0A0G2JKS1 128 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 CTAG1AP78358 180 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 KHDC1LQ5JSQ8 128 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 U3KQA8 63 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 TIMP3P35625 211 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 C9orf106Q8NAJ2 232 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 PLAUP00749 431 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
NUP50-201ENST00000347635 B3GALT5-AS1P59052 145 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 OR4A47Q6IF82 309 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 GBGT1Q8N5D6 347 aa12.33□□□□□ -0.44
NUP50-201ENST00000347635 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
NUP50-201ENST00000347635 LRRK1Q38SD2 2015 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 IGHV1-2P23083 117 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 CD40P25942 277 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 MDS2Q8NDY4 140 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 FCER1GP30273 86 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
NUP50-201ENST00000347635 OBSL1O75147 1896 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 F2RL2O00254 374 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 SERF1AO75920 110 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 COTL1Q14019 142 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 SNRNP200O75643 2136 aaKnown RBP12.32□□□□□ -0.44
NUP50-201ENST00000347635 ZNF785A8K8V0 405 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 NDUFS6O75380 124 aaKnown RBP12.32□□□□□ -0.44
NUP50-201ENST00000347635 PRNTQ86SH4 94 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 LYPD6BQ8NI32 183 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 INSIG2Q9Y5U4 225 aa12.32□□□□□ -0.44
NUP50-201ENST00000347635 PGPA6NDG6 321 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 CECR9P0C854 216 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 MUC15Q8N387 334 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 MIEN1Q9BRT3 115 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 SSBP3Q9BWW4 388 aaPredicted RBP12.31□□□□□ -0.44
NUP50-201ENST00000347635 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
NUP50-201ENST00000347635 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 PGPEP1LA6NFU8 196 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 RND2P52198 227 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
NUP50-201ENST00000347635 PIMREGQ9BSJ6 248 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
NUP50-201ENST00000347635 GFRA1P56159 465 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 MIR17HGQ75NE6 70 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
NUP50-201ENST00000347635 DPRXA6NFQ7 191 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 IGHV2-70P01814 119 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 PRO3102Q9H379 93 aa12.31□□□□□ -0.44
NUP50-201ENST00000347635 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
NUP50-201ENST00000347635 FOXI3A8MTJ6 420 aaPredicted RBP12.3□□□□□ -0.44
NUP50-201ENST00000347635 IGLV3-1P01715 115 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 MAS1LP35410 378 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 IFITM10A6NMD0 228 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 OR9G9P0C7N8 305 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 FAM27E3Q08E93 113 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 Q0VFX4 171 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 BPIFA4PQ86YQ2 179 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
NUP50-201ENST00000347635 PDLIM4P50479 330 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
NUP50-201ENST00000347635 CHODLQ9H9P2 273 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 CLEC3BP05452 202 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 MC5RP33032 325 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 TMEM97Q5BJF2 176 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 PET117Q6UWS5 81 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 TNFRSF19Q9NS68 423 aa12.3□□□□□ -0.44
NUP50-201ENST00000347635 BMPR1BO00238 502 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
NUP50-201ENST00000347635 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 Q6ZRM9 215 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 PIP4P1Q86T03 277 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 FAM90A1Q86YD7 464 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 C5orf17Q8NAS9 161 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 NPIPB11E5RHQ5 1161 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 LEPROTL1O95214 131 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 RPL27AP46776 148 aaKnown RBP12.29□□□□□ -0.44
NUP50-201ENST00000347635 RPL11P62913 178 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms