RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RAXQ9Y2V3 346 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 HTN1P15515 57 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 PNKDQ8N490 385 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 OR10J6PQ8NGY7 276 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 RABAC1Q9UI14 185 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 SP7Q8TDD2 431 aaPredicted RBP14.75□□□□□ -0.05
SPAST-202ENST00000345662 GBF1Q92538 1859 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 MFAP4P55083 255 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 FOXL1Q12952 345 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 FAM169BQ8N8A8 192 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 VCX2Q9H322 139 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 PHLDA3Q9Y5J5 127 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 ATP5LO75964 103 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 FAM53AQ6NSI3 398 aaPredicted RBP14.74□□□□□ -0.05
SPAST-202ENST00000345662 OR4X2Q8NGF9 303 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 NUDT11Q96G61 164 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 FMC1Q96HJ9 113 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 C16orf92Q96LL3 132 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 HS3ST3B1Q9Y662 390 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 IFNL4K9M1U5 179 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 ID1P41134 155 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 ST20Q9HBF5 79 aa14.74□□□□□ -0.05
SPAST-202ENST00000345662 IGKV3D-11A0A0A0MRZ8 115 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 KLK10O43240 276 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 SIGMAR1Q99720 223 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 FAM90A27PA6NNH2 459 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 DLX6P56179 175 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 MEF2CQ06413 473 aaPredicted RBP14.73□□□□□ -0.05
SPAST-202ENST00000345662 Q6AWC8 147 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 LINC00470Q9BZP3 86 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 CD55P08174 381 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 C1QTNF5Q9BXJ0 243 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 OR2K2Q8NGT1 345 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 GPR82Q96P67 336 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 SSBP4Q9BWG4 385 aaPredicted RBP14.73□□□□□ -0.05
SPAST-202ENST00000345662 CHRNA10Q9GZZ6 450 aa14.73□□□□□ -0.05
SPAST-202ENST00000345662 SCN8AQ9UQD0 1980 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 TSPAN7P41732 249 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 TMEM186Q96B77 213 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 CGB1A6NKQ9 187 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 STAG3L3P0CL85 134 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 GZMBP10144 247 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 SEC11AP67812 179 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 ACTL10Q5JWF8 245 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 CRISPLD2Q9H0B8 497 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 ORAOV1Q8WV07 137 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
SPAST-202ENST00000345662 C16orf97H3BN30 126 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 FAM166AQ6J272 317 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 METTL26Q96S19 204 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 FOXC2Q99958 501 aa14.72□□□□□ -0.05
SPAST-202ENST00000345662 NDUFS8O00217 210 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 TIMP3P35625 211 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 ORMDL3Q8N138 153 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 WNT9BO14905 357 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 TYMSP04818 313 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 PCOLCEQ15113 449 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 OR52E5Q8NH55 327 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 LYZL4Q96KX0 146 aa14.71□□□□□ -0.05
SPAST-202ENST00000345662 BEX4Q9NWD9 120 aaPredicted RBP14.71□□□□□ -0.05
SPAST-202ENST00000345662 PEAR1Q5VY43 1037 aaPredicted RBP14.71□□□□□ -0.05
SPAST-202ENST00000345662 PTPRZ1P23471 2315 aaPredicted RBP14.71□□□□□ -0.06
SPAST-202ENST00000345662 LYL1P12980 280 aa14.71□□□□□ -0.06
SPAST-202ENST00000345662 TMEM144Q7Z5S9 345 aa14.71□□□□□ -0.06
SPAST-202ENST00000345662 CACNG8Q8WXS5 425 aa14.71□□□□□ -0.06
SPAST-202ENST00000345662 COX6A1P12074 109 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 TDGF1P3P51864 188 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 UNQ5815/PRO19632Q6UWF5 114 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 TMEM256Q8N2U0 113 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 SYT8Q8NBV8 401 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 OSR1Q8TAX0 266 aaPredicted RBP14.7□□□□□ -0.06
SPAST-202ENST00000345662 NPIPB6E9PJ23 425 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 ELOVL5Q9NYP7 299 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 ZNF319Q9P2F9 582 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 PARP14Q460N5 1801 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 A8MWP6 167 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 ACP7Q6ZNF0 438 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.7□□□□□ -0.06
SPAST-202ENST00000345662 KIF26BQ2KJY2 2108 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
SPAST-202ENST00000345662 TSPAN13O95857 204 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 WFDC3Q8IUB2 231 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 OR9G1Q8NH87 305 aa14.7□□□□□ -0.06
SPAST-202ENST00000345662 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 THSD7AQ9UPZ6 1657 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 IGHV2-70P01814 119 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 NRN1LQ496H8 165 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 LPAR2Q9HBW0 351 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 WDR83OSQ9Y284 106 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 EREGO14944 169 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 GATA2P23769 480 aaPredicted RBP14.69□□□□□ -0.06
SPAST-202ENST00000345662 TIMM23BQ5SRD1 257 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 A0A1W2PRE2 83 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 SMAGPQ0VAQ4 97 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 LINC01551Q86U37 167 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 NHP2Q9NX24 153 aaKnown RBP14.69□□□□□ -0.06
SPAST-202ENST00000345662 CHCHD2Q9Y6H1 151 aaPredicted RBP14.69□□□□□ -0.06
SPAST-202ENST00000345662 UMODP07911 640 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms