RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 OR10G8Q8NGN5 311 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 SH2D2AQ9NP31 389 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 TCF19Q9Y242 345 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 PPIAL4AQ9Y536 164 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 KALRNO60229 2985 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 IGHV3OR16-8A0A075B7F1 116 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 TMEM45BQ96B21 275 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 PKIBQ9C010 78 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 CISD1Q9NZ45 108 aaKnown RBP9.95□□□□□ -0.82
USP1-201ENST00000339950 WT1P19544 449 aaPredicted RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 ZNF137PP52743 207 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 RPL31P62899 125 aaKnown RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 PQLC2Q6ZP29 291 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 LYPD6BQ8NI32 183 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 SONP18583 2426 aaKnown RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 MYO18BQ8IUG5 2567 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 CDX4O14627 284 aaPredicted RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 GCGP01275 180 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 CD24P25063 80 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 ASCL4Q6XD76 172 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 COLCA1Q6ZS62 124 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 CD177Q8N6Q3 437 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 ST6GALNAC6Q969X2 333 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 BMPR1BO00238 502 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 KBTBD11O94819 623 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 HRASP01112 189 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 INO80CQ6PI98 192 aaPredicted RBP9.94□□□□□ -0.82
USP1-201ENST00000339950 HARBI1Q96MB7 349 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 CENPEQ02224 2701 aa9.94□□□□□ -0.82
USP1-201ENST00000339950 LRP4O75096 1905 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 CCDC168Q8NDH2 2452 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 Q6ZT83 130 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 KLHDC1Q8N7A1 406 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 SCRT1Q9BWW7 348 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 SEBOXQ9HB31 216 aaPredicted RBP9.93□□□□□ -0.82
USP1-201ENST00000339950 WASHC3Q9Y3C0 194 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 PIGBOS1A0A0B4J2F0 54 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 TRGV8A0A0C4DH27 118 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A10PA6NDY2 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A8PA6NJQ4 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A7PA6NKC0 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A22PA8MWA6 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A23PA8MXZ1 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 CA2P00918 260 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 GNB2P62879 340 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 MIR17HGQ75NE6 70 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 ZNF114Q8NC26 417 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 RNF138Q8WVD3 245 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 RNASE7Q9H1E1 156 aaKnown RBP9.93□□□□□ -0.82
USP1-201ENST00000339950 SEPSECSQ9HD40 501 aaKnown RBP9.93□□□□□ -0.82
USP1-201ENST00000339950 BET1LQ9NYM9 111 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 OR6C3Q9NZP0 311 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 IGKV3D-15A0A087WSY6 115 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 IGHV2OR16-5A0A0B4J2B6 119 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 CNIH1O95406 144 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 GZMHP20718 246 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 KIR2DL2P43627 348 aaPredicted RBP9.93□□□□□ -0.82
USP1-201ENST00000339950 GNG4P50150 75 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 OR1L6Q8NGR2 347 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 SORL1Q92673 2214 aa9.93□□□□□ -0.82
USP1-201ENST00000339950 UBE2L3P68036 154 aaKnown RBP9.92□□□□□ -0.82
USP1-201ENST00000339950 C19orf35Q6ZS72 473 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 ODF3L1Q8IXM7 274 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 SAXO1Q8IYX7 474 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 FAM19A2Q8N3H0 131 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 FAM90A27PA6NNH2 459 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 MOSP00540 346 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 HOXA6P31267 233 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 RAB7AP51149 207 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 HLA-DRB5Q30154 266 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 ACSF3Q4G176 576 aaPredicted RBP9.92□□□□□ -0.82
USP1-201ENST00000339950 SPATA45Q537H7 98 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 LEMD1Q68G75 181 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 OR51B2Q9Y5P1 312 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 WNK1Q9H4A3 2382 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 TRAV5A0A0B4J249 113 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 FCER1GP30273 86 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 ARL3P36405 182 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms