RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FFAR4Q5NUL3 377 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 TRAT1Q6PIZ9 186 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 OR5T1Q8NG75 326 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 OR13D1Q8NGV5 346 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM170AQ8WVE7 144 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 TCF19Q9Y242 345 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 A0A1W2PPR1 153 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 NDUFS8O00217 210 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 REG1AP05451 166 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 SLC25A6P12236 298 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 RAB11AP62491 216 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 PEA15Q15121 130 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF674Q2M3X9 581 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 C3orf36Q3SXR2 165 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 TEX36Q5VZQ5 186 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
LIMK1-201ENST00000336180 FAM208BQ5VWN6 2430 aa10.27□□□□□ -0.76
LIMK1-201ENST00000336180 CELSR2Q9HCU4 2923 aa10.27□□□□□ -0.76
LIMK1-201ENST00000336180 E7EUB6 86 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 ITGB1BP1O14713 200 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 SOD3P08294 240 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 MMP9P14780 707 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 GATA2P23769 480 aaPredicted RBP10.27□□□□□ -0.77
LIMK1-201ENST00000336180 LOXP28300 417 aaPredicted RBP10.27□□□□□ -0.77
LIMK1-201ENST00000336180 UBE2G2P60604 165 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 ZNF439Q8NDP4 499 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 TPSG1Q9NRR2 321 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 AURKAIP1Q9NWT8 199 aaPredicted RBP10.27□□□□□ -0.77
LIMK1-201ENST00000336180 POLQO75417 2590 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 IGHV3-21A0A0B4J1V1 117 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 C1orf87Q8N0U7 546 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 OR4S2Q8NH73 311 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 LYPD6BQ8NI32 183 aa10.27□□□□□ -0.77
LIMK1-201ENST00000336180 TCF21O43680 179 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 LINC00614P0C842 121 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 ICAM4Q14773 271 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 SOHLH1Q5JUK2 328 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 DDB2Q92466 427 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
LIMK1-201ENST00000336180 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 C7orf77A4D0Y5 90 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 MAP1LC3B2A6NCE7 125 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 PPIHO43447 177 aaKnown RBP10.26□□□□□ -0.77
LIMK1-201ENST00000336180 GNLYP22749 145 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 CLEC12BQ2HXU8 276 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 TNFRSF14Q92956 283 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 LHX4Q969G2 390 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 MAP1LC3BQ9GZQ8 125 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 MS4A5Q9H3V2 200 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 USP9XQ93008 2570 aaPredicted RBP10.26□□□□□ -0.77
LIMK1-201ENST00000336180 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
LIMK1-201ENST00000336180 CNTFRP26992 372 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 UCNP55089 124 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 PKIAP61925 76 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 NUDT10Q8NFP7 164 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 OR10A7Q8NGE5 316 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 HARBI1Q96MB7 349 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 SLC39A9Q9NUM3 307 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 CLEC5AQ9NY25 188 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 LINC00312Q9Y6C7 94 aa10.26□□□□□ -0.77
LIMK1-201ENST00000336180 hCG_1809904A0A1W2PP81 198 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 A0A1W2PR64 198 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 A0A1W2PRV1 198 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 SAA1P0DJI8 122 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 DHRS7BQ6IAN0 325 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 ACTL6BO94805 426 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 CA2P00918 260 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 PRB4P10163 310 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 RAB5CP51148 216 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 TLE4Q04727 773 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 ZNF672Q499Z4 452 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 ZNF343Q6P1L6 599 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 SLC25A48Q6ZT89 311 aaKnown RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 PNKDQ8N490 385 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 ST6GALNAC3Q8NDV1 305 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 PBDC1Q9BVG4 233 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 SEPSECSQ9HD40 501 aaKnown RBP10.25□□□□□ -0.77
LIMK1-201ENST00000336180 OR51B2Q9Y5P1 312 aa10.25□□□□□ -0.77
LIMK1-201ENST00000336180 YIF1AO95070 293 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 RAB7AP51149 207 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 ONECUT1Q9UBC0 465 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 GAL3ST2Q9H3Q3 398 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 C19orf84I3L1E1 186 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 ARF6P62330 175 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 KLRD1Q13241 179 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms