RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
NCL-201ENST00000322723 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.9□□□□□ -0.82
NCL-201ENST00000322723 WASHC3Q9Y3C0 194 aa9.9□□□□□ -0.82
NCL-201ENST00000322723 IGHV1-46P01743 117 aa9.9□□□□□ -0.83
NCL-201ENST00000322723 IER3P46695 156 aa9.9□□□□□ -0.83
NCL-201ENST00000322723 OR6C3Q9NZP0 311 aa9.9□□□□□ -0.83
NCL-201ENST00000322723 AKAP13Q12802 2813 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 PLCE1Q9P212 2302 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
NCL-201ENST00000322723 MKRN2OSH3BPM6 223 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 ZNF253O75346 499 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 GYPAP02724 150 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 ZNF83P51522 516 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 RIPPLY3P57055 190 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 TAF15Q92804 592 aaKnown RBP eCLIP9.89□□□□□ -0.837e-6■□□□□ 8
NCL-201ENST00000322723 HSBP1O75506 76 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 LINC00614P0C842 121 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 CD40P25942 277 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 G6PCP35575 357 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 VDAC2P45880 294 aaPredicted RBP9.89□□□□□ -0.83
NCL-201ENST00000322723 FAM90A2PQ658T7 463 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 DCTN5Q9BTE1 182 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 VSIRQ9H7M9 311 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 A0A0G2JNJ9 132 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 IGHV3-64DA0A0J9YX35 117 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 SPINT2O43291 252 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 HRASP01112 189 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 THBDP07204 575 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 Q56UQ5 140 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 ZNF788Q6ZQV5 615 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 DOLPP1Q86YN1 238 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 P2RX4Q99571 388 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 Q9UFV3 132 aa9.89□□□□□ -0.83
NCL-201ENST00000322723 DYSFO75923 2080 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 TRGV8A0A0C4DH27 118 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 KIR2DS2P43631 304 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 PINX1Q96BK5 328 aaKnown RBP9.88□□□□□ -0.83
NCL-201ENST00000322723 M0R1B8 84 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 FCN3O75636 299 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 IGKV1D-33P01593 117 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 IGKV1-33P01594 117 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 BPIFB3P59826 476 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
NCL-201ENST00000322723 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
NCL-201ENST00000322723 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
NCL-201ENST00000322723 TOX4O94842 621 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
NCL-201ENST00000322723 ITLN1Q8WWA0 313 aa9.88□□□□□ -0.83
NCL-201ENST00000322723 K7ERU9 68 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 ZG16O60844 167 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 OR9G9P0C7N8 305 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 CBLN1P23435 193 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 SLC38A11Q08AI6 406 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 SPINK9Q5DT21 86 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 UTF1Q5T230 341 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 ST6GALNAC6Q969X2 333 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 ACTR3CQ9C0K3 210 aaPredicted RBP9.87□□□□□ -0.83
NCL-201ENST00000322723 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 TCTAP57738 103 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 C1orf194Q5T5A4 169 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 MOGAT3Q86VF5 341 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 TMEM147Q9BVK8 224 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 SLC35D1Q9NTN3 355 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 CALYQ9NYX4 217 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 DUSP13Q9UII6 198 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 KBTBD11-OT1A0A1B0GTJ5 212 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 M0QZ24 198 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 RELBQ01201 579 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 TPRX1Q8N7U7 411 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 PARLQ9H300 379 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 CLN8Q9UBY8 286 aa9.87□□□□□ -0.83
NCL-201ENST00000322723 MEF2BQ02080 365 aaPredicted RBP9.86□□□□□ -0.83
NCL-201ENST00000322723 PPP1R35Q8TAP8 253 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 TMEM170AQ8WVE7 144 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 C1orf159Q96HA4 380 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 POLR3KQ9Y2Y1 108 aaPredicted RBP9.86□□□□□ -0.83
NCL-201ENST00000322723 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 NINJ1Q92982 152 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 RNF7Q9UBF6 113 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 PSG11Q9UQ72 335 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 C8orf31Q8N9H6 132 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
NCL-201ENST00000322723 UHRF2Q96PU4 802 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 SDF2L1Q9HCN8 221 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
NCL-201ENST00000322723 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 EDDM3BP56851 147 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 ZNF816Q0VGE8 651 aaPredicted RBP9.85□□□□□ -0.83
NCL-201ENST00000322723 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 GBGT1Q8N5D6 347 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
NCL-201ENST00000322723 UQCR10Q9UDW1 63 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 LAMTOR2Q9Y2Q5 125 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 LINC00205P59089 165 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 FAM27E3Q08E93 113 aa9.85□□□□□ -0.83
NCL-201ENST00000322723 CT45A1Q5HYN5 189 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms