RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TMPRSS3P57727 454 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 DEFB124Q8NES8 71 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 EPDR1Q9UM22 224 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 CEACAM4O75871 244 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 C1QTNF9P0C862 333 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 LOC105371242A0A075B767 164 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 PPIAL4CA0A0B4J2A2 164 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 PPIAL4GP0DN37 164 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 VKORC1Q9BQB6 163 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 JPT1Q9UK76 154 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 CEACAM1P13688 526 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 LOC101059948A0A1B0GTJ6 334 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 CRYBA2P53672 197 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 LILRA6Q6PI73 481 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
SCN3B-201ENST00000299333 C9orf172C9J069 976 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 NPPCP23582 126 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 SPEM2Q0P670 501 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV3-66A0A0C4DH42 116 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 SPINT1O43278 529 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 TSPOP30536 169 aa12.61□□□□□ -0.39
SCN3B-201ENST00000299333 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 PSMG4Q5JS54 123 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 MIR17HGQ75NE6 70 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
SCN3B-201ENST00000299333 H3BRM9 83 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
SCN3B-201ENST00000299333 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 CNTFRP26992 372 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 ASIPP42127 132 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 GLRX5Q86SX6 157 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 TEX45Q8NA69 505 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 HIST3H2BBQ8N257 126 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 TNFSF13O75888 250 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 JMJD8Q96S16 334 aa12.6□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 LINC01590Q5TEZ4 76 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 DUX5Q96PT3 197 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 MAP1BP46821 2468 aaKnown RBP12.59□□□□□ -0.39
SCN3B-201ENST00000299333 TRAV2A0A0B4J234 112 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 FAM106AQ4KMX7 169 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 HEPN1Q6WQI6 88 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 S4R3C0 116 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 GLI3P10071 1580 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 IGKV1-8A0A0C4DH67 115 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
SCN3B-201ENST00000299333 FER1L6-AS1Q8NA97 138 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 CELA2AP08217 269 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 OR10J3Q5JRS4 329 aa12.59□□□□□ -0.39
SCN3B-201ENST00000299333 SCN3AQ9NY46 2000 aa12.58□□□□□ -0.39
SCN3B-201ENST00000299333 HSD52Q0P140 79 aa12.58□□□□□ -0.39
SCN3B-201ENST00000299333 COQ2Q96H96 371 aa12.58□□□□□ -0.39
SCN3B-201ENST00000299333 IFI27L2Q9H2X8 130 aa12.58□□□□□ -0.39
SCN3B-201ENST00000299333 ATXN8Q156A1 80 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
SCN3B-201ENST00000299333 FOXD3Q9UJU5 478 aaPredicted RBP12.58□□□□□ -0.4
SCN3B-201ENST00000299333 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 DOCK1Q14185 1865 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
SCN3B-201ENST00000299333 C1QL4Q86Z23 238 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 AMBPP02760 352 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 ADAMTSL5Q6ZMM2 481 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 DNM1P46Q6ZS02 220 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 C1QL2Q7Z5L3 287 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 SLC25A28Q96A46 364 aa12.58□□□□□ -0.4
SCN3B-201ENST00000299333 SMIM20Q8N5G0 67 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 PRR7Q8TB68 274 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 NPIPB11E5RHQ5 1161 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 PROB1E7EW31 1015 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 H7C1H1 209 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 DPM2O94777 84 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 TDGF1P3P51864 188 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 A0A0G2JK05 382 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 GDF15Q99988 308 aa12.57□□□□□ -0.4
SCN3B-201ENST00000299333 SRSF8Q9BRL6 282 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms