RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 RNF114Q9Y508 228 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 TNRC6AQ8NDV7 1962 aaKnown RBP12.15□□□□□ -0.46
CCNF-201ENST00000293968 LINC00310P59036 64 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 RELBQ01201 579 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 EIF4EBP1Q13541 118 aaPredicted RBP12.15□□□□□ -0.46
CCNF-201ENST00000293968 TEX43Q6ZNM6 134 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 C20orf144Q9BQM9 153 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 PROP1O75360 226 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 HINT1P49773 126 aaPredicted RBP12.15□□□□□ -0.46
CCNF-201ENST00000293968 OR4S2Q8NH73 311 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 DNAJC4Q9NNZ3 241 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 SLC45A2Q9UMX9 530 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.47
CCNF-201ENST00000293968 USF1P22415 310 aaPredicted RBP12.15□□□□□ -0.47
CCNF-201ENST00000293968 OR4B1Q8NGF8 309 aa12.15□□□□□ -0.47
CCNF-201ENST00000293968 IL19Q9UHD0 177 aa12.15□□□□□ -0.47
CCNF-201ENST00000293968 DMDP11532 3685 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 SPRY3O43610 288 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
CCNF-201ENST00000293968 IGHV3-48P01763 117 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 GPX1P07203 203 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 CAMPP49913 170 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 ZNF134P52741 427 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 UTF1Q5T230 341 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
CCNF-201ENST00000293968 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 GMPPAQ96IJ6 420 aaPredicted RBP12.14□□□□□ -0.47
CCNF-201ENST00000293968 ROS1P08922 2347 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 SELENOTP62341 195 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 MLANAQ16655 118 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 SGK494Q96LW2 274 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
CCNF-201ENST00000293968 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 RNF2Q99496 336 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 APCSP02743 223 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 VWA1Q6PCB0 445 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
CCNF-201ENST00000293968 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
CCNF-201ENST00000293968 V9GYV3 84 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 HSBP1O75506 76 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 TNFSF15O95150 251 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 Q56UQ5 140 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 HES3Q5TGS1 186 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
CCNF-201ENST00000293968 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 RND1Q92730 232 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
CCNF-201ENST00000293968 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
CCNF-201ENST00000293968 TECRQ9NZ01 308 aaKnown RBP12.13□□□□□ -0.47
CCNF-201ENST00000293968 J3QR06 171 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
CCNF-201ENST00000293968 MRPS11P82912 194 aaKnown RBP12.12□□□□□ -0.47
CCNF-201ENST00000293968 ZPBPQ9BS86 351 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 OPN3Q9H1Y3 402 aaPredicted RBP12.12□□□□□ -0.47
CCNF-201ENST00000293968 OR5G3P0C626 314 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 CECR9P0C854 216 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 Q6ZVH6 145 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 TRGV10A0A0A0MS01 117 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 C15orf65H3BRN8 121 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 FER1L6-AS2Q96M78 137 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
CCNF-201ENST00000293968 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 PCP4P48539 62 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 MFAP2P55001 183 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 UBE2L3P68036 154 aaKnown RBP12.11□□□□□ -0.47
CCNF-201ENST00000293968 DHRS13Q6UX07 377 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 A0A1W2PS18 150 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 GPR6P46095 362 aaPredicted RBP12.11□□□□□ -0.47
CCNF-201ENST00000293968 CCL11P51671 97 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 GNB1LQ9BYB4 327 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 UQCR10Q9UDW1 63 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 ZNF83P51522 516 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 TRAT1Q6PIZ9 186 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 TNCP24821 2201 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 C20orf202A1L168 122 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 PLAUP00749 431 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 CORO2AQ92828 525 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
CCNF-201ENST00000293968 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 H0Y8G0 127 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 MGST3O14880 152 aa12.1□□□□□ -0.47
CCNF-201ENST00000293968 YPEL1O60688 119 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms