RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 AKR1C2P52895 323 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 HSD17B13Q7Z5P4 300 aaPredicted RBP20.88■□□□□ 0.93
SSU72-201ENST00000291386 TMED4Q7Z7H5 227 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 ZNF429Q86V71 674 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 SELENOHQ8IZQ5 122 aaKnown RBP20.88■□□□□ 0.93
SSU72-201ENST00000291386 OR4A16Q8NH70 328 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 GNB4Q9HAV0 340 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 MGAM2Q2M2H8 2515 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 TRBV9A0A0B4J1U6 114 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 IGLC7A0M8Q6 106 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 LYRM1O43325 122 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 ANXA3P12429 323 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 AREGP15514 252 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 CTRB1P17538 263 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 CTRB2Q6GPI1 263 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 CENPSQ8N2Z9 138 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 P2RX4Q99571 388 aa20.87■□□□□ 0.93
SSU72-201ENST00000291386 A0A0G2JLM5 398 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 DBX1A6NMT0 343 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 PF4P02776 101 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 UBE2MP61081 183 aaKnown RBP20.86■□□□□ 0.93
SSU72-201ENST00000291386 WFDC9Q8NEX5 89 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 RRNAD1Q96FB5 475 aaKnown RBP20.86■□□□□ 0.93
SSU72-201ENST00000291386 RAX2Q96IS3 184 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 USMG5Q96IX5 58 aa20.86■□□□□ 0.93
SSU72-201ENST00000291386 SRPXP78539 464 aa20.85■□□□□ 0.93
SSU72-201ENST00000291386 TMEM268Q5VZI3 342 aa20.85■□□□□ 0.93
SSU72-201ENST00000291386 LSM10Q969L4 123 aaKnown RBP20.85■□□□□ 0.93
SSU72-201ENST00000291386 A0A0B4J293 547 aa20.84■□□□□ 0.93
SSU72-201ENST00000291386 PIGBOS1A0A0B4J2F0 54 aa20.84■□□□□ 0.93
SSU72-201ENST00000291386 CCL24O00175 119 aa20.84■□□□□ 0.93
SSU72-201ENST00000291386 LGALS1P09382 135 aaKnown RBP20.84■□□□□ 0.93
SSU72-201ENST00000291386 FHL3Q13643 280 aa20.84■□□□□ 0.93
SSU72-201ENST00000291386 A0A0G2JRQ6 117 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 FAM223BA6NKX1 122 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 UPK1BO75841 260 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 DHFRP00374 187 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 HSPE1P61604 102 aaKnown RBP20.83■□□□□ 0.93
SSU72-201ENST00000291386 IZUMO4Q1ZYL8 232 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 FAM223AQ8IWN6 122 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 LGI3Q8N145 548 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 LINC00482Q8N8I6 264 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 OR10W1Q8NGF6 305 aa20.83■□□□□ 0.93
SSU72-201ENST00000291386 A0A0B4J2A0 478 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 C13orf42A0A1B0GVH6 325 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 SFT2D2O95562 160 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 PRCDQ00LT1 54 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 WT1-ASQ06250 92 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 DEFB136Q30KP8 78 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 AARDQ4LEZ3 155 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 MRPL41Q8IXM3 137 aaKnown RBP20.82■□□□□ 0.92
SSU72-201ENST00000291386 LRTM2Q8N967 370 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 NECAP1Q8NC96 275 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 OR11H1Q8NG94 326 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 FANCD2OSQ96PS1 177 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 SHPKQ9UHJ6 478 aa20.82■□□□□ 0.92
SSU72-201ENST00000291386 RBMXL2O75526 392 aaKnown RBP20.81■□□□□ 0.92
SSU72-201ENST00000291386 PRH1P02810 166 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 HIST1H1BP16401 226 aaKnown RBP20.81■□□□□ 0.92
SSU72-201ENST00000291386 ASAH1Q13510 395 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 PPP1R1AQ13522 171 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 Q6ZRM9 215 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 SLC35G3Q8N808 338 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 RNASE11Q8TAA1 199 aaKnown RBP20.81■□□□□ 0.92
SSU72-201ENST00000291386 OR5B12Q96R08 314 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 PRR13Q9NZ81 148 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 TBC1D24Q9ULP9 559 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 FLVCR2Q9UPI3 526 aa20.81■□□□□ 0.92
SSU72-201ENST00000291386 DUXBA0A1W2PPF3 345 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 IGHV3-11P01762 117 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 RHOGP84095 191 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 OR1N2Q8NGR9 330 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 GPR146Q96CH1 333 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 DUX3Q96PT4 197 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 HINT2Q9BX68 163 aa20.8■□□□□ 0.92
SSU72-201ENST00000291386 IGLV11-55A0A075B6I3 123 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 INS-IGF2F8WCM5 200 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 REG1AP05451 166 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 OR13C7P0DN81 318 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 VAMP1P23763 118 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 ZNF343Q6P1L6 599 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 C19orf35Q6ZS72 473 aa20.79■□□□□ 0.92
SSU72-201ENST00000291386 ALX4Q9H161 411 aaPredicted RBP20.79■□□□□ 0.92
SSU72-201ENST00000291386 ST8SIA3O43173 380 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 TCRBP04435 133 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 DEFA4P12838 97 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 CD33P20138 364 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 ZNF616Q08AN1 781 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 ANKRD55Q3KP44 614 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 NMSQ5H8A3 153 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 OR52E5Q8NH55 327 aa20.78■□□□□ 0.92
SSU72-201ENST00000291386 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.78■□□□□ 0.92
SSU72-201ENST00000291386 OR2J3O76001 311 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 HSPB1P04792 205 aaKnown RBP20.77■□□□□ 0.92
SSU72-201ENST00000291386 OR8U8P0C7N1 319 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 DEFA5Q01523 94 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 IFITM3Q01628 133 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 ATP5G2Q06055 141 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 PDLIM3Q53GG5 364 aaPredicted RBP20.77■□□□□ 0.92
SSU72-201ENST00000291386 MZT2BQ6NZ67 158 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms