RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
SHROOM4-201ENST00000289292 CCL21O00585 134 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 CA1P00915 261 aaPredicted RBP12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 UNC13CQ8NB66 2214 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 NPIPB13A6NJU9 1138 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 NPIPB4C9JG80 1138 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 TBR1Q16650 682 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 IL4P05112 153 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 CYTL1Q9NRR1 136 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 GBF1Q92538 1859 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 H3BUT2 72 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 ID1P41134 155 aa12.93□□□□□ -0.34
SHROOM4-201ENST00000289292 TYMSP04818 313 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PHLDA3Q9Y5J5 127 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 COX5BP10606 129 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 LGALS3P17931 250 aaKnown RBP12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 OR4C13Q8NGP0 309 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 ZNF414Q96IQ9 312 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 TIMP4Q99727 224 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 TMEM56-RWDD3S4R434 201 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 IGHV3OR16-10A0A075B7F0 116 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 IGHV3OR16-8A0A075B7F1 116 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PEX7O00628 323 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PSG9Q00887 426 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PRSS8Q16651 343 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 RNF144BQ7Z419 303 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 PILRBQ9UKJ0 227 aa12.92□□□□□ -0.34
SHROOM4-201ENST00000289292 MFAP4P55083 255 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 MRPL16Q9NX20 251 aaKnown RBP12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 TRBV20OR9-2A0A075B6H5 130 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 A0A1W2PR77 199 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 PRSS2P07478 247 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 LIPFP07098 398 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 FLVCR1-AS1Q8TAF5 88 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 MEGF9Q9H1U4 602 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 SOX21Q9Y651 276 aaPredicted RBP12.91□□□□□ -0.34
SHROOM4-201ENST00000289292 PPIAL4CA0A0B4J2A2 164 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 PPIAL4GP0DN37 164 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 PF4V1P10720 104 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 ZNF324BQ6AW86 544 aaPredicted RBP12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 KLHDC3Q9BQ90 382 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 IFI27L2Q9H2X8 130 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 SCN10AQ9Y5Y9 1956 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 TSPAN13O95857 204 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 SELENOKQ9Y6D0 94 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 BRWD1Q9NSI6 2320 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 JOSD1Q15040 202 aaPredicted RBP12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 PPP1R32Q7Z5V6 425 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 PNKDQ8N490 385 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 C1QTNF5Q9BXJ0 243 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 COX6CP09669 75 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 GPR82Q96P67 336 aa12.9□□□□□ -0.34
SHROOM4-201ENST00000289292 KLRB1Q12918 225 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 LY6EQ16553 131 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 LDLRAD2Q5SZI1 272 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 TCF24Q7RTU0 167 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 AMBPP02760 352 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 CD5P06127 495 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 FADS6Q8N9I5 356 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 VWCEQ96DN2 955 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 HIGD1CA8MV81 97 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 HGFACQ04756 655 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 FGFBP3Q8TAT2 258 aa12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 ZNF703Q9H7S9 590 aaPredicted RBP12.89□□□□□ -0.35
SHROOM4-201ENST00000289292 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 RPP21Q9H633 154 aaKnown RBP12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 FOXA2Q9Y261 457 aaPredicted RBP12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 WDR82Q6UXN9 313 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 JKAMPQ9P055 326 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms