RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PI3P19957 117 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 CBX3Q13185 183 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 KLF5Q13887 457 aaPredicted RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 AARDQ4LEZ3 155 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 KHDC1LQ5JSQ8 128 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 FAAP20Q6NZ36 180 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM65Q6PI78 240 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 C19orf35Q6ZS72 473 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 SSX9Q7RTT3 188 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 CMTM1Q8IZ96 169 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 GDPD1Q8N9F7 314 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 GLYATL2Q8WU03 294 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 DCUN1D4Q92564 292 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM230Q96A57 120 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 USMG5Q96IX5 58 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 TP53RKQ96S44 253 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 SRSF8Q9BRL6 282 aaKnown RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 THAP7Q9BT49 309 aaPredicted RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 AKIP1Q9NQ31 210 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM14BQ9NUH8 114 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 IGLV11-55A0A075B6I3 123 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 A0A0B4J293 547 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 H0Y980 276 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 CDS2O95674 445 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 KRASP01116 189 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 PRH1P02810 166 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 TRGV3P03979 118 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 APELAP0DMC3 54 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 UCP1P25874 307 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 PSMB6P28072 239 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 G6PCP35575 357 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 RPL27AP46776 148 aaKnown RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 MFAP2P55001 183 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 PIGPP57054 158 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 WT1-ASQ06250 92 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF616Q08AN1 781 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 IL18Q14116 193 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 MEF2DQ14814 521 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 SURF2Q15527 256 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 PVRIGQ6DKI7 326 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 Q6ZRM9 215 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 OR10W1Q8NGF6 305 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 MARCH1Q8TCQ1 289 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 FYTTD1Q96QD9 318 aaKnown RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 OR5B12Q96R08 314 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 SRRQ9GZT4 340 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 NDUFA13Q9P0J0 144 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF257Q9Y2Q1 563 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 A0A0G2JRQ6 117 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 NUDT19A8MXV4 375 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 INS-IGF2F8WCM5 200 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 K7EIL1 84 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 CREBL2O60519 120 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 IGHV3-11P01762 117 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 AKAIN1P0CW23 69 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 SLURP1P55000 103 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 TPPP2P59282 170 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 SUPT4H1P63272 117 aaKnown RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 BAK1Q16611 211 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 ACSM6Q6P461 480 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 ADAMTSL5Q6ZMM2 481 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 NECAP1Q8NC96 275 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 OR51S1Q8NGJ8 323 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 LHFPL5Q8TAF8 219 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 MCRIP2Q9BUT9 160 aaKnown RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 HRASLSQ9HDD0 168 aa7.01□□□□□ -1.29
HMGN1-201ENST00000288344 AURKAIP1Q9NWT8 199 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-201ENST00000288344 A0A0G2JLM5 398 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 C3orf85A0A1B0GTC6 90 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 WI2-2373I1.2A0A1W2PRP0 233 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 FAM223BA6NKX1 122 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 LINC01619G3V211 115 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 BMPR1BO00238 502 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 NDUFB8O95169 186 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 IFNA6P05013 189 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 SERPINE2P07093 398 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 OR8U8P0C7N1 319 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 RPA2P15927 270 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 RHOGP84095 191 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 DEFA5Q01523 94 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 DHODHQ02127 395 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 IZUMO4Q1ZYL8 232 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 SP6Q3SY56 376 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF429Q86V71 674 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 FAM223AQ8IWN6 122 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 ZFAND1Q8TCF1 268 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 ABHD5Q8WTS1 349 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 DEDD2Q8WXF8 326 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 GALNT14Q96FL9 552 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 TMEM56Q96MV1 263 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 RANGRFQ9HD47 186 aaPredicted RBP7□□□□□ -1.29
HMGN1-201ENST00000288344 NSG2Q9Y328 171 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 TMEM56-RWDD3S4R434 201 aa7□□□□□ -1.29
HMGN1-201ENST00000288344 TEX13DA0A0J9YY54 714 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 CRYM-AS1A6NIL9 109 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms