RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CDKN1AP38936 164 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 HSPE1P61604 102 aaKnown RBP10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PAFAH1B2P68402 229 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 CT45A1Q5HYN5 189 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 ZNF705AQ6ZN79 300 aaPredicted RBP10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 BAGE3Q86Y29 109 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 BAGE2Q86Y30 109 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 CT45A3Q8NHU0 189 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 FOXA2Q9Y261 457 aaPredicted RBP10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TNCP24821 2201 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR20EP86478 221 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR20CP86479 221 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR20DP86480 221 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR20BP86481 221 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR20AP86496 221 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 MOGAT3Q86VF5 341 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 OR8I2Q8N0Y5 310 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 FAM216AQ8WUB2 273 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 IDI2-AS1Q9NZ38 188 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 V9GYV3 84 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 SVILO95425 2214 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 YLPM1P49750 1951 aaKnown RBP10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 PCNX2A6NKB5 2137 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 AHRRA9YTQ3 701 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 LINC00869P0C866 280 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 PSG5Q15238 335 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 SPINK4O60575 86 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 ESDP10768 282 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 GNG4P50150 75 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 RAB7AP51149 207 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 RANP62826 216 aaKnown RBP10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 C17orf58Q2M2W7 97 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 FAM201AQ5SY85 155 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 MOB3BQ86TA1 216 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 LRFN3Q9BTN0 628 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
SLC28A1-201ENST00000286749 RAI1Q7Z5J4 1906 aaPredicted RBP10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 AREGP15514 252 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 CRYBB3P26998 211 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 CCL11P51671 97 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 TEX43Q6ZNM6 134 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 ST6GALNAC3Q8NDV1 305 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 NEUROG1Q92886 237 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 OR51B2Q9Y5P1 312 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 LOC400499M0QZD8 3231 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 HELTA6NFD8 242 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 CGB3P0DN86 165 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 CGB7P0DN87 165 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 PQLC2Q6ZP29 291 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 DOLPP1Q86YN1 238 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 LYG1Q8N1E2 194 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 OR5AU1Q8NGC0 362 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 NABP2Q9BQ15 211 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 PAM16Q9Y3D7 125 aa10.86□□□□□ -0.67
SLC28A1-201ENST00000286749 ICE1Q9Y2F5 2266 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 PRR33A8MZF0 331 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 CASP6P55212 293 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 MRPS11P82912 194 aaKnown RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 DUX4L9Q6RFH8 374 aaPredicted RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 BHLHA15Q7RTS1 189 aaPredicted RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 FDCSPQ8NFU4 85 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 TNFSF13O75888 250 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 GATA2P23769 480 aaPredicted RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 ZNF83P51522 516 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 Q0VG73 95 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 FXYD3Q14802 87 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 ZNF71Q9NQZ8 489 aaPredicted RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 PLSCR4Q9NRQ2 329 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
SLC28A1-201ENST00000286749 NKX2-8O15522 239 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 SPRY3O43610 288 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 CFHR2P36980 270 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 GNG10P50151 68 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 SLC35B1P78383 322 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 CORO2AQ92828 525 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 FAM103A1Q9BTL3 118 aaKnown RBP10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 GNB1LQ9BYB4 327 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 GNB4Q9HAV0 340 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 NAT8BQ9UHF3 227 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 IGKV1OR2-108A0A075B7D4 117 aa10.84□□□□□ -0.67
SLC28A1-201ENST00000286749 J3QR06 171 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms