RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 RPL13AP40429 203 aaKnown RBP10.23□□□□□ -0.77
ERBB2-201ENST00000269571 UCP2P55851 309 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 TMEM136Q6ZRR5 245 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 FAM89BQ8N5H3 189 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 STPG4Q8N801 248 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 HARBI1Q96MB7 349 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 CSTL1Q9H114 145 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 CHTOPQ9Y3Y2 248 aaKnown RBP10.23□□□□□ -0.77
ERBB2-201ENST00000269571 AMY1AP04745 511 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 GPR183P32249 361 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-201ENST00000269571 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 FAM131CQ96AQ9 280 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 PAXXQ9BUH6 204 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 IGHV1-45A0A0A0MS14 117 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF324O75467 553 aaPredicted RBP10.23□□□□□ -0.77
ERBB2-201ENST00000269571 PGLYRP4Q96LB8 373 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 MRPL13Q9BYD1 178 aaKnown RBP10.23□□□□□ -0.77
ERBB2-201ENST00000269571 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 ACTL10Q5JWF8 245 aa10.23□□□□□ -0.77
ERBB2-201ENST00000269571 CGAP01215 116 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-201ENST00000269571 GUCD1Q96NT3 240 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 FBLN5Q9UBX5 448 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 A1L4Q6 167 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 IL6RP08887 468 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-201ENST00000269571 MAS1LP35410 378 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 GPR6P46095 362 aaPredicted RBP10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ID3Q02535 119 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF841Q6ZN19 808 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 LSM10Q969L4 123 aaKnown RBP10.22□□□□□ -0.77
ERBB2-201ENST00000269571 SIP14410 1827 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 NPIPB13A6NJU9 1138 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 C17orf98A8MV24 154 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 NPIPB4C9JG80 1138 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 WNT9BO14905 357 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 GCHFRP30047 84 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 Q1RN00 199 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF788Q6ZQV5 615 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 PRNTQ86SH4 94 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF645Q8N7E2 425 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 MRPS18CQ9Y3D5 142 aaKnown RBP10.22□□□□□ -0.77
ERBB2-201ENST00000269571 HILPDAQ9Y5L2 63 aa10.22□□□□□ -0.77
ERBB2-201ENST00000269571 ZNF407Q9C0G0 2248 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 IGKV1-12A0A0C4DH73 117 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 IGKV1D-12P01611 117 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 GATA2P23769 480 aaPredicted RBP10.21□□□□□ -0.77
ERBB2-201ENST00000269571 ACSF3Q4G176 576 aaPredicted RBP10.21□□□□□ -0.77
ERBB2-201ENST00000269571 SPSB4Q96A44 273 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 C5orf30Q96GV9 206 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 SEPSECSQ9HD40 501 aaKnown RBP10.21□□□□□ -0.77
ERBB2-201ENST00000269571 F11RQ9Y624 299 aaKnown RBP10.21□□□□□ -0.77
ERBB2-201ENST00000269571 IGKV3D-11A0A0A0MRZ8 115 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 A0A1B0GUS0 222 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 PGPA6NDG6 321 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 PRDX2P32119 198 aa10.21□□□□□ -0.77
ERBB2-201ENST00000269571 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 FAM222BQ8WU58 562 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 TCF19Q9Y242 345 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.78
ERBB2-201ENST00000269571 NKX2-8O15522 239 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 MPDU1O75352 247 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 HCP5Q6MZN7 132 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 Q8NFD4 153 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 RNF7Q9UBF6 113 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 ZNF257Q9Y2Q1 563 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 TMEM56-RWDD3S4R434 201 aa10.21□□□□□ -0.78
ERBB2-201ENST00000269571 IGHV3-72A0A0B4J1Y9 119 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 RFPL3SP0C7P2 107 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 INO80CQ6PI98 192 aaPredicted RBP10.2□□□□□ -0.78
ERBB2-201ENST00000269571 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 RNASE7Q9H1E1 156 aaKnown RBP10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 HYPMO75409 117 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 ATP1A1-AS1Q5TC04 95 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 CITED1Q99966 193 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 NAA38Q9BRA0 125 aaKnown RBP10.2□□□□□ -0.78
ERBB2-201ENST00000269571 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 DEPPQ9NTK1 212 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 TCF20Q9UGU0 1960 aaKnown RBP10.2□□□□□ -0.78
ERBB2-201ENST00000269571 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A10PA6NDY2 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A18PA6NE21 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A16PA6NEW6 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A20PA6NIJ5 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A8PA6NJQ4 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A7PA6NKC0 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A22PA8MWA6 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 A8MWL6 223 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A12PA8MX19 464 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms