RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 HIST1H2BDP58876 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST1H2BCP62807 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST2H2BEQ16778 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.66□□□□□ -1.66
XRN1-201ENST00000264951 LINC00305Q7Z4B0 112 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 WFDC5Q8TCV5 224 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST1H2BHQ93079 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST1H2BNQ99877 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 HIST1H2BMQ99879 126 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 RTN4RQ9BZR6 473 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 WNT10AQ9GZT5 417 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 SIRT4Q9Y6E7 314 aaPredicted RBP4.66□□□□□ -1.66
XRN1-201ENST00000264951 IGHMP01871 453 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 ZNF721Q8TF20 911 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 PLPPR2Q96GM1 343 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 COQ2Q96H96 371 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 ZNF48Q96MX3 618 aaPredicted RBP4.66□□□□□ -1.66
XRN1-201ENST00000264951 KLK15Q9H2R5 256 aa4.66□□□□□ -1.66
XRN1-201ENST00000264951 ROS1P08922 2347 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 OR2H2O95918 312 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 SPINK8P0C7L1 97 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 TDGF1P13385 188 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 WNT2BQ93097 391 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 MRPL20Q9BYC9 149 aaKnown RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 LHX9Q9NQ69 397 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 PEMTQ9UBM1 199 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 RREB1Q92766 1687 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 TRAV5A0A0B4J249 113 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 TMEM14DPA8MWL7 114 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 F8W1H4 67 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 LEPROTO15243 131 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 CXCL10P02778 98 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 PF4V1P10720 104 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 LINC01545Q5VT33 79 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 RASL10AQ92737 203 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 DPH3Q96FX2 82 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 CST9LQ9H4G1 147 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 PKIGQ9Y2B9 76 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 MRPS18BQ9Y676 258 aaKnown RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 ZNFX1Q9P2E3 1918 aaKnown RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 LIMS1P48059 325 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 INSL4Q14641 139 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 FAM214BQ7L5A3 538 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 RPRMLQ8N4K4 120 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 OR5P3Q8WZ94 311 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 VKORC1Q9BQB6 163 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 TM2D1Q9BX74 207 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 UBL5Q9BZL1 73 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 PRR32B1ATL7 298 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 OTX1P32242 354 aaPredicted RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 GAGE1Q13065 139 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 LAGE3Q14657 143 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 TNFRSF14Q92956 283 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 DUX5Q96PT3 197 aa4.65□□□□□ -1.66
XRN1-201ENST00000264951 ZNF703Q9H7S9 590 aaPredicted RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 SEPSECSQ9HD40 501 aaKnown RBP4.65□□□□□ -1.66
XRN1-201ENST00000264951 ARFGEF3Q5TH69 2177 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 COL6A6A6NMZ7 2263 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 UMODP07911 640 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 FXYD3Q14802 87 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 DCAF10Q5QP82 559 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 SPATA31B1PQ5VZV4 182 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 CBLN3Q6UW01 205 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 GGTLC1Q9BX51 225 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 ZNF576Q9H609 170 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 IL18BPO95998 194 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 LHX2P50458 406 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 TEX45Q8NA69 505 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 PLCE1Q9P212 2302 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 PSMB11A5LHX3 300 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 SPEM2Q0P670 501 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 HIST1H2BLQ99880 126 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 TRPM3Q9HCF6 1732 aaPredicted RBP4.65□□□□□ -1.67
XRN1-201ENST00000264951 OVOL1O14753 267 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 ACYP1P07311 99 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 C4AP0C0L4 1744 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 C4BP0C0L5 1744 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 PGFP49763 221 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 SLC25A39Q9BZJ4 359 aaPredicted RBP4.65□□□□□ -1.67
XRN1-201ENST00000264951 C21orf62Q9NYP8 219 aa4.65□□□□□ -1.67
XRN1-201ENST00000264951 KIF13BQ9NQT8 1826 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 COL9A1P20849 921 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 RPL32P62910 135 aaKnown RBP4.64□□□□□ -1.67
XRN1-201ENST00000264951 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 H0Y8X5 98 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 SOCS3O14543 225 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 SRSF7Q16629 238 aaKnown RBP eCLIP4.64□□□□□ -1.67
XRN1-201ENST00000264951 WFDC6Q9BQY6 131 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 PIMREGQ9BSJ6 248 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 B9A039 149 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 MOSP00540 346 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 FOXA3P55318 350 aaPredicted RBP4.64□□□□□ -1.67
XRN1-201ENST00000264951 FUT5Q11128 374 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 ZNF646O15015 1829 aaPredicted RBP4.64□□□□□ -1.67
XRN1-201ENST00000264951 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 FOXI3A8MTJ6 420 aaPredicted RBP4.64□□□□□ -1.67
XRN1-201ENST00000264951 F8VVB4 439 aa4.64□□□□□ -1.67
XRN1-201ENST00000264951 F8VWA3 439 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms