RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 STPG3Q8N7X2 389 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 OR2Z1Q8NG97 314 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 SPRR3Q9UBC9 169 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 SIAH2O43255 324 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 SRP14P37108 136 aaKnown RBP10.74□□□□□ -0.69
SNX1-201ENST00000261889 REG1BP48304 166 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 CENPWQ5EE01 88 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 STPG4Q8N801 248 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 TXN2Q99757 166 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 RNF24Q9Y225 148 aa10.74□□□□□ -0.69
SNX1-201ENST00000261889 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 C17orf112F2Z3M2 114 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 DLEU1O43261 78 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 CAMPP49913 170 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 SUMO1P63165 101 aaKnown RBP10.73□□□□□ -0.69
SNX1-201ENST00000261889 TMEM144Q7Z5S9 345 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 CD177Q8N6Q3 437 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 LRRC29Q8WV35 223 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 FAM173AQ9BQD7 235 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 IL6RP08887 468 aaPredicted RBP10.73□□□□□ -0.69
SNX1-201ENST00000261889 BRS3P32247 399 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 VWA1Q6PCB0 445 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 UNQ5815/PRO19632Q6UWF5 114 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 C1orf159Q96HA4 380 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 TRIB1Q96RU8 372 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 B4GALT7Q9UBV7 327 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 TNRC6AQ8NDV7 1962 aaKnown RBP10.73□□□□□ -0.69
SNX1-201ENST00000261889 C9orf172C9J069 976 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 ZNF253O75346 499 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 IGHV1-2P23083 117 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 CCKARP32238 428 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 PCP4P48539 62 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 SIGLECL1Q8N7X8 197 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 BEND2Q8NDZ0 799 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 CIB3Q96Q77 187 aaPredicted RBP10.73□□□□□ -0.69
SNX1-201ENST00000261889 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 MBNL3Q9NUK0 354 aaKnown RBP10.73□□□□□ -0.69
SNX1-201ENST00000261889 WDR83OSQ9Y284 106 aa10.73□□□□□ -0.69
SNX1-201ENST00000261889 DNPH1O43598 174 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 GCHFRP30047 84 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 S100A7P31151 101 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 TPPP2P59282 170 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 EFNB3Q15768 340 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 SPATA45Q537H7 98 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 FBXW9Q5XUX1 488 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 Q6ZN92 141 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 C19orf35Q6ZS72 473 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 BCL2L2Q92843 193 aaPredicted RBP10.72□□□□□ -0.69
SNX1-201ENST00000261889 GP6Q9HCN6 339 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 DCAF16Q9NXF7 216 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 CLCF1Q9UBD9 225 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 OTOGLQ3ZCN5 2332 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 DLX1P56177 255 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 ERVK11-1P61568 191 aa10.72□□□□□ -0.69
SNX1-201ENST00000261889 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
SNX1-201ENST00000261889 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 RELBQ01201 579 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 Q56UQ5 140 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 DCAF10Q5QP82 559 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
SNX1-201ENST00000261889 PMCHL2Q9BQD1 86 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 DSCAMO60469 2012 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 RNF212BA8MTL3 300 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 RNF151Q2KHN1 245 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 DHRS13Q6UX07 377 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 WDR82Q6UXN9 313 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 OR9G1Q8NH87 305 aa10.71□□□□□ -0.69
SNX1-201ENST00000261889 SPRY3O43610 288 aa10.71□□□□□ -0.7
SNX1-201ENST00000261889 CA2P00918 260 aa10.71□□□□□ -0.7
SNX1-201ENST00000261889 COMPP49747 757 aaPredicted RBP10.71□□□□□ -0.7
SNX1-201ENST00000261889 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.7
SNX1-201ENST00000261889 LYG1Q8N1E2 194 aa10.71□□□□□ -0.7
SNX1-201ENST00000261889 KIR3DL3Q8N743 410 aa10.71□□□□□ -0.7
SNX1-201ENST00000261889 OPN3Q9H1Y3 402 aaPredicted RBP10.71□□□□□ -0.7
SNX1-201ENST00000261889 NRN1Q9NPD7 142 aa10.71□□□□□ -0.7
SNX1-201ENST00000261889 IGKV3D-15A0A087WSY6 115 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 CHRNB4P30926 498 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 RAB7AP51149 207 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 DUSP3P51452 185 aaPredicted RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 NHLH1Q02575 133 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 ASCL5Q7RTU5 278 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 TMEM45BQ96B21 275 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 STARD4Q96DR4 205 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 TCF19Q9Y242 345 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 PDE6DO43924 150 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 GFRA3O60609 400 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 P0C879 139 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 PYYP10082 97 aa10.7□□□□□ -0.7
SNX1-201ENST00000261889 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
SNX1-201ENST00000261889 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms