RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CCL13Q99616 98 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 C2orf88Q9BSF0 95 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 ZCCHC14Q8WYQ9 949 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNF586Q9NXT0 402 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 SH3BGRL2Q9UJC5 107 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 JPT1Q9UK76 154 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 PROP1O75360 226 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 WNT2P09544 360 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 P0C879 139 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 RELBQ01201 579 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 BHLHA15Q7RTS1 189 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 SGK494Q96LW2 274 aa13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 SSBP3Q9BWW4 388 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-202ENST00000261368 LOC400499M0QZD8 3231 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 F2Z2F3 143 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 ARSJQ5FYB0 599 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 Q8TCH9 128 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 NABP2Q9BQ15 211 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 PLXNB1O43157 2135 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 SAA2P0DJI9 122 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 IRF2P14316 349 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 DNLZQ5SXM8 178 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 DUX4L9Q6RFH8 374 aaPredicted RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 WDR31Q8NA23 367 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 TXN2Q99757 166 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 SLC35D1Q9NTN3 355 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 PLAUP00749 431 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 TYMSP04818 313 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 FOXL1Q12952 345 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNF124Q15973 351 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 TDRG1Q3Y452 100 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 H1FXQ92522 213 aaKnown RBP13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 TMEM106BQ9NUM4 274 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 SLC45A2Q9UMX9 530 aa13.36□□□□□ -0.27
SNCAIP-202ENST00000261368 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 OR5G3P0C626 314 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 TDGF1P13385 188 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 TMEM183BQ1AE95 376 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 LBHQ53QV2 105 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 SPRNQ5BIV9 151 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 APELAP0DMC3 54 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 PIEZO2Q9H5I5 2752 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 BDP1A6H8Y1 2624 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 C15orf65H3BRN8 121 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 CD59P13987 128 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 CD99P14209 185 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 CDKN1AP38936 164 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 ATOH7Q8N100 152 aa13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 EAF1Q96JC9 268 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-202ENST00000261368 BOD1L1Q8NFC6 3051 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 SPRY4Q9C004 299 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 ZNF331Q9NQX6 463 aaPredicted RBP13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 TMPRSS2O15393 492 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 RAB7AP51149 207 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 UBE2L3P68036 154 aaKnown RBP13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 PCSK5Q92824 1860 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 TMEM265A0A087WTH1 108 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 CAMPP49913 170 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 RTL8BQ17RB0 113 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 FAM19A2Q8N3H0 131 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 CORO2AQ92828 525 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 IFI27L2Q9H2X8 130 aa13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
SNCAIP-202ENST00000261368 VDAC2P45880 294 aaPredicted RBP13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 VWC2Q2TAL6 325 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 CT45A1Q5HYN5 189 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 CT45A3Q8NHU0 189 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 PRR7Q8TB68 274 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 K7EN84 100 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 SRIP30626 198 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 TAS2R45P59539 299 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 TNFAIP6P98066 277 aaPredicted RBP13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 OR9G1Q8NH87 305 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 CLCF1Q9UBD9 225 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 TRAV17A0A0B4J275 112 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 CCL8P80075 99 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 Q6ZWC4 215 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 RAB1CQ92928 201 aa13.33□□□□□ -0.28
SNCAIP-202ENST00000261368 SNRNP40Q96DI7 357 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 571.7 ms