RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 DYNAPQ8N1N2 210 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 VSIRQ9H7M9 311 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 FBP1P09467 338 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 IL3RAP26951 378 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 C3orf36Q3SXR2 165 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 MARC2Q969Z3 335 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 BEX4Q9NWD9 120 aaPredicted RBP9.43□□□□□ -0.9
LIN28A-201ENST00000254231 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
LIN28A-201ENST00000254231 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 TSPAN15O95858 294 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 LFNGQ8NES3 379 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 TMEM56Q96MV1 263 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 SLC25A31Q9H0C2 315 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 ZNF430Q9H8G1 570 aaPredicted RBP9.43□□□□□ -0.9
LIN28A-201ENST00000254231 TMEM56-RWDD3S4R434 201 aa9.43□□□□□ -0.9
LIN28A-201ENST00000254231 A0A0U1RQK1 487 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 F2RL2O00254 374 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 RBP4P02753 201 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 GAPDHP04406 335 aaKnown RBP9.42□□□□□ -0.9
LIN28A-201ENST00000254231 AREGP15514 252 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
LIN28A-201ENST00000254231 UBA52P62987 128 aaKnown RBP9.42□□□□□ -0.9
LIN28A-201ENST00000254231 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
LIN28A-201ENST00000254231 BCL6BQ8N143 479 aaPredicted RBP9.42□□□□□ -0.9
LIN28A-201ENST00000254231 Q8N7P7 452 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 DPM3Q9P2X0 92 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 MFSD2BA6NFX1 497 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 NPIPB11E5RHQ5 1161 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 RNASEK-C17orf49H0YIS7 233 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 GPR137BO60478 399 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 THBS3P49746 956 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 ASPHD1Q5U4P2 390 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 C11orf71Q6IPW1 123 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 RHOFQ9HBH0 211 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 KIAA1456Q9P272 454 aa9.42□□□□□ -0.9
LIN28A-201ENST00000254231 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 BUB1B-PAK6H3BSN5 160 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 MOSP00540 346 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 CA2P00918 260 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 OR5G3P0C626 314 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
LIN28A-201ENST00000254231 PRR31Q5SQ13 230 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 ODF3L1Q8IXM7 274 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 FAM216AQ8WUB2 273 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 AUP1Q9Y679 476 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 ORM2P19652 201 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
LIN28A-201ENST00000254231 HLA-DRB5Q30154 266 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 LEMD1Q68G75 181 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 SSX8Q7RTT4 187 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 C12orf57Q99622 126 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 GNG13Q9P2W3 67 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 A0A1B0GU03 582 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
LIN28A-201ENST00000254231 MEF2CQ06413 473 aaPredicted RBP9.41□□□□□ -0.9
LIN28A-201ENST00000254231 OR4D5Q8NGN0 318 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 OR4C13Q8NGP0 309 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 ASCL2Q99929 193 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 GAB2Q9UQC2 676 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 WASHC3Q9Y3C0 194 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 PDZD2O15018 2839 aa9.41□□□□□ -0.9
LIN28A-201ENST00000254231 H0YJW9 148 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 VMA21Q3ZAQ7 101 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 MIDNQ504T8 468 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 MIC13Q5XKP0 118 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 ZNF66Q6ZN08 573 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 NABP2Q9BQ15 211 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 BARX1Q9HBU1 254 aaPredicted RBP9.4□□□□□ -0.9
LIN28A-201ENST00000254231 HBG1P69891 147 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 HBG2P69892 147 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 CST9LP1Q5W188 147 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
LIN28A-201ENST00000254231 NOL4LQ96MY1 436 aaPredicted RBP9.4□□□□□ -0.9
LIN28A-201ENST00000254231 SCAF4O95104 1147 aaKnown RBP9.4□□□□□ -0.91
LIN28A-201ENST00000254231 SVBPQ8N300 66 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 C11orf42Q8N5U0 333 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 ISOC2Q96AB3 205 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 UHRF2Q96PU4 802 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 YAE1D1Q9NRH1 226 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 COA4Q9NYJ1 87 aa9.4□□□□□ -0.91
LIN28A-201ENST00000254231 G3V318 75 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 KBTBD11O94819 623 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 SLC25A6P12236 298 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 NPY1RP25929 384 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 PAX9P55771 341 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 ID3Q02535 119 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 DTX2Q86UW9 622 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 ZNF439Q8NDP4 499 aa9.39□□□□□ -0.91
LIN28A-201ENST00000254231 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms