RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 OR4F4Q96R69 305 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 SMIM7Q9BQ49 75 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 IGF2RP11717 2491 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 TRBV23-1A0A0A0MS06 115 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 FNDC10F2Z333 226 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 LYNX1G3V0Z9 82 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 LYNX1P0DP58 116 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 ZNF137PP52743 207 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 PDPNQ86YL7 162 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 C11orf42Q8N5U0 333 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 NAT8Q9UHE5 227 aa20.46■□□□□ 0.87
TMEM55B-201ENST00000250489 COL8A2P25067 703 aa20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 CYP2G1PQ6ZSU1 146 aa20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 Q8WTZ3 238 aa20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 SSMEM1Q8WWF3 244 aa20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 PRELID1Q9Y255 219 aa20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 NEIL1Q96FI4 390 aaPredicted RBP20.45■□□□□ 0.86
TMEM55B-201ENST00000250489 KALRNO60229 2985 aa20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 ATP5IP56385 69 aaPredicted RBP20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 ZNF674Q2M3X9 581 aa20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 BSXQ3C1V8 233 aa20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 OR4C13Q8NGP0 309 aa20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 RPUSD4Q96CM3 377 aaKnown RBP20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 TMEM242Q9NWH2 141 aa20.44■□□□□ 0.86
TMEM55B-201ENST00000250489 B2MP61769 119 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 C2orf83Q53S99 150 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 C1QL4Q86Z23 238 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 PARLQ9H300 379 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 RALYQ9UKM9 306 aaKnown RBP20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 CXCL1P09341 107 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 RPL8P62917 257 aaKnown RBP20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 TMEM241Q24JQ0 296 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 STPG3Q8N7X2 389 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 TMEM167AQ8TBQ9 72 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 TMEM133Q9H2Q1 129 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 WASHC3Q9Y3C0 194 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 URGCP-MRPS24S4R325 110 aa20.43■□□□□ 0.86
TMEM55B-201ENST00000250489 FSTL3O95633 263 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 STAG3L2P0CL84 134 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 STAG3L3P0CL85 134 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 RPL29P47914 159 aaKnown RBP20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 RAB31Q13636 194 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 TGIF2LXQ8IUE1 241 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 OR1L8Q8NGR8 309 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 OR4A5Q8NH83 315 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 PCGF1Q9BSM1 259 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 TMEM204Q9BSN7 226 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 COMMD5Q9GZQ3 224 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 NDUFA4L2Q9NRX3 87 aa20.42■□□□□ 0.86
TMEM55B-201ENST00000250489 C11orf94C9JXX5 98 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 IGHV2-70P01814 119 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 RNASE2P10153 161 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 IGFBP2P18065 325 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 USF1P22415 310 aaPredicted RBP20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 SNRPEP62304 92 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 ZNF841Q6ZN19 808 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 OR10W1Q8NGF6 305 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 RPL35P42766 123 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 PPOXP50336 477 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 AKR1D1P51857 326 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 RND2P52198 227 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 LINC00518Q8N0U6 118 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 VSTM2AQ8TAG5 236 aa20.41■□□□□ 0.86
TMEM55B-201ENST00000250489 C5orf52A6NGY3 159 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 CLDN34H7C241 214 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 IGLV2-23P01705 113 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 ARL14EPLP0DKL9 152 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 RPS10P46783 165 aaKnown RBP20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 PRR20EP86478 221 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 PRR20CP86479 221 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 PRR20DP86480 221 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 PRR20BP86481 221 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 PRR20AP86496 221 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 ADIRFQ15847 76 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 ABHD5Q8WTS1 349 aa20.4■□□□□ 0.86
TMEM55B-201ENST00000250489 TGIF2-C20orf24A0A0A6YYL0 155 aa20.39■□□□□ 0.86
TMEM55B-201ENST00000250489 IL3RAP26951 378 aa20.39■□□□□ 0.86
TMEM55B-201ENST00000250489 SPNS3Q6ZMD2 512 aa20.39■□□□□ 0.86
TMEM55B-201ENST00000250489 FAM122AQ96E09 287 aa20.39■□□□□ 0.86
TMEM55B-201ENST00000250489 CTDSP1Q9GZU7 261 aa20.39■□□□□ 0.86
TMEM55B-201ENST00000250489 INS-IGF2F8WCM5 200 aa20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 CXorf1O96002 111 aa20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 S100A6P06703 90 aa20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 UBE2G2P60604 165 aa20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 RPL23P62829 140 aaKnown RBP20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 TMEM144Q7Z5S9 345 aa20.39■□□□□ 0.85
TMEM55B-201ENST00000250489 TNCP24821 2201 aa20.38■□□□□ 0.85
TMEM55B-201ENST00000250489 NPPCP23582 126 aa20.38■□□□□ 0.85
TMEM55B-201ENST00000250489 MOB3BQ86TA1 216 aa20.38■□□□□ 0.85
TMEM55B-201ENST00000250489 MC5RP33032 325 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 ATP5G3P48201 142 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 TNFRSF14Q92956 283 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 SSX3Q99909 188 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 SLC45A2Q9UMX9 530 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 E7EUB6 86 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 PDE6DO43924 150 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 LINC00869P0C866 280 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 RHOBP62745 196 aa20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 SEPSECSQ9HD40 501 aaKnown RBP20.37■□□□□ 0.85
TMEM55B-201ENST00000250489 SPTA1P02549 2419 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms