RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPTBN2O15020 2390 aa15.95■□□□□ 0.14
CDC42EP1-201ENST00000249014 APC2O95996 2303 aa15.95■□□□□ 0.14
CDC42EP1-201ENST00000249014 RPL31P62899 125 aaKnown RBP15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 EFNB3Q15768 340 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 RTL8BQ17RB0 113 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 SPATA31B1PQ5VZV4 182 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 LINC01551Q86U37 167 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 OR4X1Q8NH49 305 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 ANAPC16Q96DE5 110 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 TMEM204Q9BSN7 226 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 MIOXQ9UGB7 285 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPP1R2P9O14990 202 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 CXorf1O96002 111 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRCDQ00LT1 54 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 PYY3Q5JQD4 70 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 ZNF833PQ6ZTB9 187 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 FAM122AQ96E09 287 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 OR5B12Q96R08 314 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 SAP30LQ9HAJ7 183 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 ZNF257Q9Y2Q1 563 aa15.94■□□□□ 0.14
CDC42EP1-201ENST00000249014 IGFBP2P18065 325 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 S100PP25815 95 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR30Q53SZ7 412 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 NEUROG1Q92886 237 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 PCGF1Q9BSM1 259 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 OR51M1Q9H341 326 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 GAL3ST2Q9H3Q3 398 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 PLEKHA3Q9HB20 300 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 TEX50A0A1B0GTY4 177 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 PGPEP1LA6NFU8 196 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 LINC00587B1AMM8 73 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 SAA1P0DJI8 122 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 S100A2P29034 98 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 TMEM200BQ69YZ2 307 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 MOB3BQ86TA1 216 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 ZNF114Q8NC26 417 aa15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 MRPL20Q9BYC9 149 aaKnown RBP15.93■□□□□ 0.14
CDC42EP1-201ENST00000249014 A0A1W2PPQ1 181 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 TMEM178BH3BS89 294 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 CHRNA7P36544 502 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 RPL29P47914 159 aaKnown RBP15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 MEF2CQ06413 473 aaPredicted RBP15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 ZNF835Q9Y2P0 537 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 YTHDF2Q9Y5A9 579 aaKnown RBP15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 TRBV20OR9-2A0A075B6H5 130 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPIAL4EA0A075B759 164 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 ELOA3CA0A087WX78 387 aaPredicted RBP15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPIAL4DF5H284 164 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 F6UZH7 168 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 FOXH1O75593 365 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPIAL4FP0DN26 164 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR20EP86478 221 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR20CP86479 221 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR20DP86480 221 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR20BP86481 221 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PRR20AP86496 221 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 LYPD2Q6UXB3 125 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 CCL17Q92583 94 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 ZNF714Q96N38 554 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPIAL4AQ9Y536 164 aa15.92■□□□□ 0.14
CDC42EP1-201ENST00000249014 PKDREJQ9NTG1 2253 aa15.91■□□□□ 0.14
CDC42EP1-201ENST00000249014 OR10D4PQ8NGN7 298 aa15.91■□□□□ 0.14
CDC42EP1-201ENST00000249014 BET1LQ9NYM9 111 aa15.91■□□□□ 0.14
CDC42EP1-201ENST00000249014 SCO2A0A1W2PP80 73 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 LINC00869P0C866 280 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 GCHFRP30047 84 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 REG1BP48304 166 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 CDPF1Q6NVV7 123 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 WFIKKN1Q96NZ8 548 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 IGKV1OR2-108A0A075B7D4 117 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 PPP5D1E7EU14 171 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 C1QTNF9P0C862 333 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 RHOBP62745 196 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 RAB31Q13636 194 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 OR10W1Q8NGF6 305 aa15.9■□□□□ 0.14
CDC42EP1-201ENST00000249014 ARFGEF3Q5TH69 2177 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 FNDC10F2Z333 226 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 H0YJW9 148 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 TNFRSF13BO14836 293 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 GGCTO75223 188 aaKnown RBP15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 SPACA3Q8IXA5 215 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR2T10Q8NGZ9 312 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 H1FXQ92522 213 aaKnown RBP15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 LRFN3Q9BTN0 628 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 TMEM106BQ9NUM4 274 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 SRP14P37108 136 aaKnown RBP15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 DIAPH2-AS1Q14236 149 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 MLANAQ16655 118 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 HARBI1Q96MB7 349 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 TXNDC17Q9BRA2 123 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 CTSZQ9UBR2 303 aa15.89■□□□□ 0.13
CDC42EP1-201ENST00000249014 FAM3BP58499 235 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 TBR1Q16650 682 aa15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR5AN1Q8NGI8 311 aa15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR4P4Q8NGL7 312 aa15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 OR5B3Q8NH48 314 aa15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 OSR1Q8TAX0 266 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 RNASE6Q93091 150 aaKnown RBP15.88■□□□□ 0.13
CDC42EP1-201ENST00000249014 SLC45A2Q9UMX9 530 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 264.6 ms