RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 HS3ST3B1Q9Y662 390 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CSRP3P50461 194 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 RPL8P62917 257 aaKnown RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 SPATA31B1PQ5VZV4 182 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 IL36BQ9NZH7 164 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 ODAMA1E959 279 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 LINC00205P59089 165 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 DEFB123Q8N688 67 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 NHP2Q9NX24 153 aaKnown RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 PSME4Q14997 1843 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 HEXA-AS1Q9H8Q6 139 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 ZNF107Q9UII5 783 aaPredicted RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 A0A0U1RRA0 63 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 hDV102S1A0JD36 115 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 C1orf100Q5SVJ3 147 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 ZNRF1Q8ND25 227 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 COLCA2A8K830 154 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 NAPSAO96009 420 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 FGF12P61328 243 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 RPL27AP46776 148 aaKnown RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 FBLN7Q53RD9 439 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 PCSK4Q6UW60 755 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 LAMTOR2Q9Y2Q5 125 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 MPC1Q9Y5U8 109 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 SHANK3Q9BYB0 1731 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 TCF19Q9Y242 345 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 PYYP10082 97 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 MYOD1P15172 320 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 MYLKQ15746 1914 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 SPTBN4Q9H254 2564 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 NCR2O95944 276 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 CDKN1AP38936 164 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 LCN2P80188 198 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 ZNF501Q96CX3 271 aaPredicted RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 K7N7A8 449 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 HLA-DRB1P01911 266 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 HERVK_113P61574 105 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 RPL31P62899 125 aaKnown RBP6.38□□□□□ -1.39
RIF1-201ENST00000243326 CEACAM21Q3KPI0 293 aa6.38□□□□□ -1.39
RIF1-201ENST00000243326 C9JQL5 133 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 M0R381 172 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 LINC00305Q7Z4B0 112 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 NPCDR1Q9BY65 106 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 TNFSF14O43557 240 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 CLEC1BQ9P126 229 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 COL24A1Q17RW2 1714 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 TRBV20OR9-2A0A075B6H5 130 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 CD8AP01732 235 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 AMBPP02760 352 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 CKS1BP61024 79 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 ROM1Q03395 351 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 SRD5A1P18405 259 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 SPCS1Q9Y6A9 102 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 ZCCHC24Q8N2G6 241 aaKnown RBP6.37□□□□□ -1.39
RIF1-201ENST00000243326 MARVELD3Q96A59 401 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 MIEN1Q9BRT3 115 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 A0A1W2PQD3 144 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 LNP1A1A4G5 178 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 TMEM108Q6UXF1 575 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 LOXL4Q96JB6 756 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 JMJD8Q96S16 334 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 C9JCJ5 164 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 AREGP15514 252 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 UBR3Q6ZT12 1888 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 ZNF714Q96N38 554 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 MARCH11A6NNE9 402 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 TMEM14DPA8MWL7 114 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 HIST1H1AQ02539 215 aaPredicted RBP6.37□□□□□ -1.39
RIF1-201ENST00000243326 NHSL1Q5SYE7 1610 aa6.37□□□□□ -1.39
RIF1-201ENST00000243326 UBE2CO00762 179 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 LGALS3P17931 250 aaKnown RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 MPV17P39210 176 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 LGALS7P47929 136 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 LOC285556D6RIA3 1793 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 TRA2AQ13595 282 aaKnown RBP eCLIP6.36□□□□□ -1.392e-8■■■□□ 17.3
RIF1-201ENST00000243326 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ZNF319Q9P2F9 582 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 GREM1O60565 184 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 EIF4EBP2Q13542 120 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 C12orf54Q6X4T0 127 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 GPR82Q96P67 336 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 CDX2Q99626 313 aaPredicted RBP6.36□□□□□ -1.39
RIF1-201ENST00000243326 LEPP41159 167 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ZNF525Q8N782 197 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 WBP1LQ9NX94 342 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ADCYAP1P18509 176 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 MST1P26927 711 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 ZP4Q12836 540 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 SSPNQ14714 243 aa6.36□□□□□ -1.39
RIF1-201ENST00000243326 SPSB4Q96A44 273 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms