RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TRAPPC2P0DI81 140 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 TRAPPC2BP0DI82 140 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 DEFA4P12838 97 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 IL7P13232 177 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 HIST1H1BP16401 226 aaKnown RBP8.78□□□□□ -1
SF3B6-201ENST00000233468 AKR1C4P17516 323 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 RUNX1Q01196 453 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 LCNL1Q6ZST4 164 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 DPF1Q92782 380 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 MRGPRFQ96AM1 343 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 GALNT14Q96FL9 552 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 SEC22AQ96IW7 307 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 MS4A10Q96PG2 267 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 TP53RKQ96S44 253 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 PDCD10Q9BUL8 212 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 MCRIP2Q9BUT9 160 aaKnown RBP8.78□□□□□ -1
SF3B6-201ENST00000233468 KLK15Q9H2R5 256 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 THYN1Q9P016 225 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 OR51B2Q9Y5P1 312 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
SF3B6-201ENST00000233468 NBEAL2Q6ZNJ1 2754 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 C15orf61A6NNL5 157 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 SOX15O60248 233 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 CDS2O95674 445 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 LGALS1P09382 135 aaKnown RBP8.77□□□□□ -1.01
SF3B6-201ENST00000233468 OR5AC1P0C628 307 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 OR8U8P0C7N1 319 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 APELAP0DMC3 54 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 PSMB6P28072 239 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 RAB25P57735 213 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 OR2B8PP59922 312 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 ZNF846Q147U1 533 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 SP6Q3SY56 376 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 TMEM128Q5BJH2 165 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 C10orf55Q5SWW7 151 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 TMED4Q7Z7H5 227 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 ADAD2Q8NCV1 583 aaKnown RBP8.77□□□□□ -1.01
SF3B6-201ENST00000233468 OR1L6Q8NGR2 347 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 OR1N2Q8NGR9 330 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
SF3B6-201ENST00000233468 IL22RA2Q969J5 263 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
SF3B6-201ENST00000233468 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
SF3B6-201ENST00000233468 TRAV3A0A0B4J244 114 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 TEX50A0A1B0GTY4 177 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 HMX3A6NHT5 357 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 TEX22C9J3V5 150 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 CRYGCP07315 174 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 MECP2P51608 486 aaKnown RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 UBE2MP61081 183 aaKnown RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 HSPE1P61604 102 aaKnown RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 ZNF616Q08AN1 781 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 ASPHD1Q5U4P2 390 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 ZNF429Q86V71 674 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 LGI3Q8N145 548 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 CENPSQ8N2Z9 138 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 NECAP1Q8NC96 275 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 WFDC9Q8NEX5 89 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 OR11H1Q8NG94 326 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 GLYATL2Q8WU03 294 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 SDHCQ99643 169 aaPredicted RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 HINT2Q9BX68 163 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 RANGRFQ9HD47 186 aaPredicted RBP8.76□□□□□ -1.01
SF3B6-201ENST00000233468 TMEM14BQ9NUH8 114 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
SF3B6-201ENST00000233468 LINC00854A0A1B0GVQ3 168 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 LINC01619G3V211 115 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 I3L521 148 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 HSPB1P04792 205 aaKnown RBP8.75□□□□□ -1.01
SF3B6-201ENST00000233468 CTRB1P17538 263 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 ERHP84090 104 aaKnown RBP8.75□□□□□ -1.01
SF3B6-201ENST00000233468 RHOGP84095 191 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 KIAA0141Q14154 515 aaPredicted RBP8.75□□□□□ -1.01
SF3B6-201ENST00000233468 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 TMEM268Q5VZI3 342 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 CTRB2Q6GPI1 263 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 MZT2BQ6NZ67 158 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 RAX2Q96IS3 184 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 P2RX4Q99571 388 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 ENY2Q9NPA8 101 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 NDUFA4L2Q9NRX3 87 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.75□□□□□ -1.01
SF3B6-201ENST00000233468 ZMAT5Q9UDW3 170 aaKnown RBP8.75□□□□□ -1.01
SF3B6-201ENST00000233468 NSG2Q9Y328 171 aa8.75□□□□□ -1.01
SF3B6-201ENST00000233468 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 A0A0B4J2A0 478 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 DUXBA0A1W2PPF3 345 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 LYRM1O43325 122 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 NDUFB6O95139 128 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 IFNA17P01571 189 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 OR13C7P0DN81 318 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 ZP3P21754 424 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 VAMP1P23763 118 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms