RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 APC2O95996 2303 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 F6UZH7 168 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 PDE6DO43924 150 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 CEACAM4O75871 244 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 H1FXQ92522 213 aaKnown RBP11.98□□□□□ -0.49
CNOT3-201ENST00000221232 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 A8MXE2 369 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 STAG3L2P0CL84 134 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 STAG3L3P0CL85 134 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CT45A6P0DMU7 189 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CT45A5P0DMU8 189 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CT45A7P0DMV0 189 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 IL3RAP26951 378 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 STUMQ69YW2 141 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CCL17Q92583 94 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 DIRC2Q96SL1 478 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 PRSS47A8MTI9 375 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 CXorf1O96002 111 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 ASPHD1Q5U4P2 390 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 Q6ZS92 163 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 OR52E5Q8NH55 327 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 SPINK4O60575 86 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 OR10J4P0C629 311 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 GCHFRP30047 84 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 PAX5Q02548 391 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 OR5I1Q13606 314 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 DIAPH2-AS1Q14236 149 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 KCNIP4Q6PIL6 250 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 FAM169BQ8N8A8 192 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 KCNIP2Q9NS61 270 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
CNOT3-201ENST00000221232 MPDU1O75352 247 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
CNOT3-201ENST00000221232 TNFSF4P23510 183 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 DLX1P56177 255 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.49
CNOT3-201ENST00000221232 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 PLEKHA3Q9HB20 300 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 TMEM14BQ9NUH8 114 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 TRAPPC1Q9Y5R8 145 aa11.96□□□□□ -0.49
CNOT3-201ENST00000221232 TGOLN2O43493 480 aa11.96□□□□□ -0.5
CNOT3-201ENST00000221232 OR4A8P0C604 315 aa11.96□□□□□ -0.5
CNOT3-201ENST00000221232 PSG5Q15238 335 aa11.96□□□□□ -0.5
CNOT3-201ENST00000221232 IMMP2LQ96T52 175 aa11.96□□□□□ -0.5
CNOT3-201ENST00000221232 LSM4Q9Y4Z0 139 aaKnown RBP11.96□□□□□ -0.5
CNOT3-201ENST00000221232 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 CHRNB4P30926 498 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 CCKARP32238 428 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 KIR2DS2P43631 304 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 VENTXO95231 258 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 DEFA6Q01524 100 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF788Q6ZQV5 615 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 OR9G1Q8NH87 305 aa11.95□□□□□ -0.5
CNOT3-201ENST00000221232 MRPL20Q9BYC9 149 aaKnown RBP11.95□□□□□ -0.5
CNOT3-201ENST00000221232 TACC2O95359 2948 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 TEX50A0A1B0GTY4 177 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 FAM90A9PA6NNJ1 464 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 E7EUB6 86 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
CNOT3-201ENST00000221232 OR10J1P30954 320 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 TIMP3P35625 211 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 PCP4P48539 62 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 RAB31Q13636 194 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF439Q8NDP4 499 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 SLC25A10Q9UBX3 287 aaPredicted RBP11.94□□□□□ -0.5
CNOT3-201ENST00000221232 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
CNOT3-201ENST00000221232 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 DYSFO75923 2080 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 A0A0G2JNJ9 132 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 GRIFINA4D1Z8 144 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 DPRXA6NFQ7 191 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF729A6NN14 1252 aaPredicted RBP11.94□□□□□ -0.5
CNOT3-201ENST00000221232 OR7C2O60412 319 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
CNOT3-201ENST00000221232 APELAP0DMC3 54 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 G0S2P27469 103 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 RHOBP62745 196 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 TMEM256Q8N2U0 113 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 OR2T6Q8NHC8 308 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 RAB1CQ92928 201 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 Q9UFV3 132 aa11.94□□□□□ -0.5
CNOT3-201ENST00000221232 CD33P20138 364 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
CNOT3-201ENST00000221232 SSTP61278 116 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 BSPH1Q075Z2 132 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 LYPD2Q6UXB3 125 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms