RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NPCDR1Q9BY65 106 aa9.51□□□□□ -0.89
USP31-201ENST00000219689 SYNGR1O43759 233 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 TEX38Q6PEX7 206 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 ATG4DQ86TL0 474 aaPredicted RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 POLR3KQ9Y2Y1 108 aaPredicted RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 TRBV5-7A0A0A0MS05 114 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 ZIC3O60481 467 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 SRSF5Q13243 272 aaKnown RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 MGST2Q99735 147 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 GATAD1Q8WUU5 269 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 MTORP42345 2549 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 WFDC6Q9BQY6 131 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 LINC00615Q96LM1 132 aaPredicted RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 C1QTNF9P0C862 333 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 CDKN1BP46527 198 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 ERVK11-1P61568 191 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 HSPE1P61604 102 aaKnown RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
USP31-201ENST00000219689 ZADH2Q8N4Q0 377 aa9.5□□□□□ -0.89
USP31-201ENST00000219689 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 MPV17L2Q567V2 206 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 PIN1P1O15428 100 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 COX7A1P24310 79 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 ZFP36L2P47974 494 aaKnown RBP9.49□□□□□ -0.89
USP31-201ENST00000219689 CLEC1BQ9P126 229 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 CGAP01215 116 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 IL2RAP01589 272 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 SLC25A10Q9UBX3 287 aaPredicted RBP9.49□□□□□ -0.89
USP31-201ENST00000219689 TRAV2A0A0B4J234 112 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 IL23AQ9NPF7 189 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 CENPVL1A0A0U1RR11 272 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 GABRG2P18507 467 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 CXXC4Q9H2H0 198 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 ZSWIM8A7E2V4 1837 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 HRKO00198 91 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 LRRC75BQ2VPJ9 315 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 COQ2Q96H96 371 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 MBNL3Q9NUK0 354 aaKnown RBP9.49□□□□□ -0.89
USP31-201ENST00000219689 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 LIMS1P48059 325 aa9.49□□□□□ -0.89
USP31-201ENST00000219689 ATP5LO75964 103 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 OR4A5Q8NH83 315 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 IGLV3-16A0A075B6K0 115 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 CD33P20138 364 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 ZNF83P51522 516 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 UNQ9370/PRO34162Q6UXP9 181 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 RABAC1Q9UI14 185 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 ZG16O60844 167 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 CACNG7P62955 275 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 FGFRL1Q8N441 504 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 VSTM2LQ96N03 204 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 WFDC1Q9HC57 220 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 A0A1W2PQM1 296 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 LRRC61Q9BV99 259 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 CX3CL1P78423 397 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 REG1AP05451 166 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 REG1BP48304 166 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 CCL17Q92583 94 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 RTBDNQ9BSG5 229 aaPredicted RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 OR2H1Q9GZK4 316 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 YBX2Q9Y2T7 364 aaKnown RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 IGKV3D-11A0A0A0MRZ8 115 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 SS18L1O75177 396 aaPredicted RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 IGKV3-11P04433 115 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
USP31-201ENST00000219689 ZNF488Q96MN9 340 aa9.48□□□□□ -0.89
USP31-201ENST00000219689 DPM2O94777 84 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 CCL20P78556 96 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 LY6G6FQ5SQ64 297 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 MRGPRX1Q96LB2 322 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 GPR82Q96P67 336 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 CDCA3Q99618 268 aaPredicted RBP9.47□□□□□ -0.89
USP31-201ENST00000219689 FGF16O43320 207 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 TNFSF15O95150 251 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 FOXL2P58012 376 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 NXPH1P58417 271 aa9.47□□□□□ -0.89
USP31-201ENST00000219689 RPS20P60866 119 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms