RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ZIC4Q8N9L1 334 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 FBLN7Q53RD9 439 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 A8MXK9 166 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 DUSP14O95147 198 aaKnown RBP5.21□□□□□ -1.58
VPS13D-201ENST00000011700 SELENOPP49908 381 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 HSD52Q0P140 79 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 DCAF10Q5QP82 559 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 FGFRL1Q8N441 504 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 OR5P3Q8WZ94 311 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 Q96M66 194 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 RPRMQ9NS64 109 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 MALP21145 153 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF56Q15929 161 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 Q6ZT83 130 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 PRSS27Q9BQR3 290 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 NAPSAO96009 420 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 SRIP30626 198 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 SPATA31B1PQ5VZV4 182 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 LYZL2Q7Z4W2 148 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 NPCDR1Q9BY65 106 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 COL9A3Q14050 684 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM252Q8N6L7 170 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 DPH3P1Q9H4G8 78 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 PLSCR3Q9NRY6 295 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 ADAMTS20P59510 1910 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 IZUMO1RA6ND01 250 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 OOSP1A8MZH6 123 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 SIRT4Q9Y6E7 314 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-201ENST00000011700 TRBV7-9A0A0J9YWB2 115 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 ASPDHA6ND91 283 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 EDN3P14138 238 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF660Q6AZW8 331 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-201ENST00000011700 CFAP161Q6P656 301 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF880Q6PDB4 577 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 PRO1933Q9H354 126 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 RNF115Q9Y4L5 304 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 TLN2Q9Y4G6 2542 aa5.21□□□□□ -1.58
VPS13D-201ENST00000011700 PTPRSQ13332 1948 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 A0A1W2PRE2 83 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 HBDP02042 147 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 PTGER1P34995 402 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 FOXL1Q12952 345 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF324BQ6AW86 544 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-201ENST00000011700 MSRB3Q8IXL7 192 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM74BQ9NUR3 256 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF257Q9Y2Q1 563 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 DPM2O94777 84 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ABHD17AQ96GS6 310 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 RNF5Q99942 180 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 OSTCQ9NRP0 149 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV5-51A0A0C4DH38 117 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 BGLAPP02818 100 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 C8orf44Q96CB5 159 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SCGB3A1Q96QR1 104 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 TLN1Q9Y490 2541 aaKnown RBP5.2□□□□□ -1.58
VPS13D-201ENST00000011700 TRGV11A0A075B6L2 103 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF205O95201 554 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 PCGF1Q9BSM1 259 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SPINT1O43278 529 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 APOMO95445 188 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 UCP1P25874 307 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 DSCR9P59020 149 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 POU2AF1Q16633 256 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 CCL28Q9NRJ3 127 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SLC6A13Q9NSD5 602 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 A8MWV9 139 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 LEPP41159 167 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF841Q6ZN19 808 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 IL17RELQ6ZVW7 336 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 GPR146Q96CH1 333 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 WDYHV1Q96HA8 205 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 NDUFAF3Q9BU61 184 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SLC25A15Q9Y619 301 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 A0A1B0GWB2 263 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 C1QAP02745 245 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 PF4V1P10720 104 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 CENPWQ5EE01 88 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 LINC01555Q8NAE3 123 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 IL36RNQ9UBH0 155 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 LINC00312Q9Y6C7 94 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SPINK4O60575 86 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 SRD5A1P18405 259 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 APCDD1LQ8NCL9 501 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 WFDC5Q8TCV5 224 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 RPP21Q9H633 154 aaKnown RBP5.2□□□□□ -1.58
VPS13D-201ENST00000011700 FOXJ2Q9P0K8 574 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 HS3ST3B1Q9Y662 390 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 COX11Q9Y6N1 276 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV3-15A0A0B4J1V0 119 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 C9JCJ5 164 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 H0Y8X5 98 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 CISD3P0C7P0 127 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 KCNK17Q96T54 332 aa5.2□□□□□ -1.58
VPS13D-201ENST00000011700 DEFB108AA8MXU0 73 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 ECSCRQ19T08 205 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM54Q969K7 222 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 ISOC2Q96AB3 205 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms