RNA–Protein interactions for RNA: ENST00000638802.1

PAX6-240, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-240	ENST00000638802	MINDY2	Q8NBR6	621 aa		11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	RNASE11	Q8TAA1	199 aa	Known RBP	11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	RBPMS	Q93062	196 aa	Known RBP	11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	RRNAD1	Q96FB5	475 aa	Known RBP	11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	SPIN2A	Q99865	258 aa		11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	SPIN2B	Q9BPZ2	258 aa		11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	COMMD5	Q9GZQ3	224 aa		11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	FOXA2	Q9Y261	457 aa	Predicted RBP	11.37	□□□□□ -0.59
PAX6-240	ENST00000638802	OR9G9	P0C7N8	305 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	VAMP1	P23763	118 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	SRPX	P78539	464 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	CD83	Q01151	205 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	IFITM3	Q01628	133 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	FOXE3	Q13461	319 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	C19orf54	Q5BKX5	351 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	C10orf55	Q5SWW7	151 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	TMEM65	Q6PI78	240 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	OR5M8	Q8NGP6	311 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	OR4A16	Q8NH70	328 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	IL22RA2	Q969J5	263 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	TMEM56	Q96MV1	263 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	CITED2	Q99967	270 aa	Predicted RBP	11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	FKBP11	Q9NYL4	201 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	PRND	Q9UKY0	176 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	FLVCR2	Q9UPI3	526 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	TMEM56-RWDD3	S4R434	201 aa		11.36	□□□□□ -0.59
PAX6-240	ENST00000638802	TET2	Q6N021	2002 aa	Predicted RBP	11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	PIGBOS1	A0A0B4J2F0	54 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	FAM240B	A0A1B0GVZ2	78 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	IGKV1-5	P01602	117 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	TCRB	P04435	133 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	DEFA1	P59665	94 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	DEFA3	P59666	94 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	PPP1R1A	Q13522	171 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	TCTEX1D4	Q5JR98	221 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	KHDC1L	Q5JSQ8	128 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	TMEM268	Q5VZI3	342 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	NDUFA11	Q86Y39	141 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	FAM219A	Q8IW50	185 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	SELENOH	Q8IZQ5	122 aa	Known RBP	11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	LHFPL5	Q8TAF8	219 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	FYTTD1	Q96QD9	318 aa	Known RBP	11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	C20orf85	Q9H1P6	137 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	NSG2	Q9Y328	171 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	C15orf61	A6NNL5	157 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	RBMXL2	O75526	392 aa	Known RBP	11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	SFT2D2	O95562	160 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	IGLV1-40	P01703	118 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	APELA	P0DMC3	54 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	MYOD1	P15172	320 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	PSMB8	P28062	276 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	ASPHD1	Q5U4P2	390 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	HIST2H2BD	Q6DRA6	164 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	LGI3	Q8N145	548 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	RNF152	Q8N8N0	203 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	OR5T1	Q8NG75	326 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	ZFP57	Q9NU63	452 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	OR51B2	Q9Y5P1	312 aa		11.35	□□□□□ -0.59
PAX6-240	ENST00000638802	TEX22	C9J3V5	150 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802		E7EUB6	86 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802		P0C879	139 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	PF4V1	P10720	104 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	OR2B8P	P59922	312 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	C2orf68	Q2NKX9	166 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	NSUN5P1	Q3KNT7	163 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	THOC7	Q6I9Y2	204 aa	Known RBP	11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	OR1L8	Q8NGR8	309 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	OR5B3	Q8NH48	314 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	ENKUR	Q8TC29	256 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	QTRT1	Q9BXR0	403 aa	Known RBP	11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	ZNF355P	Q9NSJ1	428 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	TMEM14B	Q9NUH8	114 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	NUDT15	Q9NV35	164 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	PRR13	Q9NZ81	148 aa		11.34	□□□□□ -0.59
PAX6-240	ENST00000638802	DNHD1	Q96M86	4753 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802		A0A0B4J2A0	478 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	TEX50	A0A1B0GTY4	177 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	HMX3	A6NHT5	357 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802		H3BUA1	57 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802		M0QZ24	198 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	SOX15	O60248	233 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	HLA-A	P01891	365 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	RPLP1	P05386	114 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	OR4E1	P0C645	316 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	ANXA7	P20073	488 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	RAB9A	P51151	201 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	RAB25	P57735	213 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	C4orf46	Q504U0	113 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	LCNL1	Q6ZST4	164 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	TTC9C	Q8N5M4	171 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	SLC35G3	Q8N808	338 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	CASTOR1	Q8WTX7	329 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	LSM10	Q969L4	123 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	SRSF8	Q9BRL6	282 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	ALX4	Q9H161	411 aa	Predicted RBP	11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	COA4	Q9NYJ1	87 aa		11.33	□□□□□ -0.6
PAX6-240	ENST00000638802	SHPK	Q9UHJ6	478 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms