RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	USP9Y	O00507	2555 aa	Predicted RBP	12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SRSF3	P84103	164 aa	Known RBP	12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MIC13	Q5XKP0	118 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	ZNF524	Q96C55	264 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GRAMD2B	Q96HH9	432 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PTBP3	O95758	552 aa	Known RBP	12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MELTF	P08582	738 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SLC35B1	P78383	322 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SLC35E3	Q7Z769	313 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SGK494	Q96LW2	274 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	NPVF	Q9HCQ7	196 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	NAT8B	Q9UHF3	227 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C10orf113	Q5VZT2	155 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	REC114	Q7Z4M0	266 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MMD2	Q8IY49	270 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SRD5A3	Q9H8P0	318 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TCF19	Q9Y242	345 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GOLT1B	Q9Y3E0	138 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGHV3-49	A0A0A0MS15	119 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997		J3QW42	95 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	LINC00869	P0C866	280 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SELENOH	Q8IZQ5	122 aa	Known RBP	12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM210B	Q96KR6	192 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CHRDL1	Q9BU40	450 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FBXL15	Q9H469	300 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C2CD3	Q4AC94	2353 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGKV1-12	A0A0C4DH73	117 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGKV1D-12	P01611	117 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGHG3	P01860	377 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SPCS3	P61009	180 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	EFNB1	P98172	346 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	EIF4E3	Q8N5X7	224 aa	Known RBP	12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TMEM18	Q96B42	140 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	JPT1	Q9UK76	154 aa		12.03	□□□□□ -0.48
NEDD4L-238	ENST00000635997	NRN1L	Q496H8	165 aa		12.02	□□□□□ -0.48
NEDD4L-238	ENST00000635997	NABP1	Q96AH0	204 aa		12.02	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C17orf98	A8MV24	154 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997		F8VVB4	439 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997		F8VWA3	439 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CLDN34	H7C241	214 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	LILRA1	O75019	489 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	HSPE1	P61604	102 aa	Known RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	WDFY1	Q8IWB7	410 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	OR5R1	Q8NH85	324 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MBD3L3	A6NE82	208 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	KBTBD11	O94819	623 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	FHIT	P49789	147 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TAS2R60	P59551	318 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	BSX	Q3C1V8	233 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SLC35E4	Q6ICL7	350 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	POC1A	Q8NBT0	407 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PXMP4	Q9Y6I8	212 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	USP9X	Q93008	2570 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	HSBP1	O75506	76 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGFBP3	P17936	291 aa	Predicted RBP	12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DHRS11	Q6UWP2	260 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	WDR82	Q6UXN9	313 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ELOVL1	Q9BW60	279 aa		12.02	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV3D-15	A0A087WSY6	115 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1D-8	A0A087WSZ0	117 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IQCF6	A8MYZ5	107 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CSN3	P07498	182 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ZNF345	Q14585	488 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	OR4C13	Q8NGP0	309 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	C20orf202	A1L168	122 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TCF21	O43680	179 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TPPP2	P59282	170 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PMS2P11	Q13670	270 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DEDD	O75618	318 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CD74	P04233	296 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SMIM17	P0DL12	118 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TNFRSF9	Q07011	255 aa		12.01	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ORM1	P02763	201 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SLC25A16	P16260	332 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	C11orf42	Q8N5U0	333 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1D-13	A0A0B4J2D9	117 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TRGC2	P03986	189 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1-13	P0DP09	117 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CRYGS	P22914	178 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	OR4A5	Q8NH83	315 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MRPL30	Q8TCC3	161 aa	Known RBP	12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	NPIPB3	Q92617	1050 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997		J3QRE1	110 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PGA5	P0DJD9	388 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	GPX4	P36969	197 aa	Predicted RBP	12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	B3GALT5-AS1	P59052	145 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	GFI1	Q99684	422 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997		B4DSR2	109 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PMCH	P20382	165 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CDX1	P47902	265 aa	Predicted RBP	12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PPOX	P50336	477 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TMEM187	Q14656	261 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PLSCR4	Q9NRQ2	329 aa		12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TMEM167B	Q9NRX6	74 aa		12	□□□□□ -0.49

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