RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ZNF735P0CB33 412 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 ECI1P42126 302 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 DEFA5Q01523 94 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 TBC1D26Q86UD7 250 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 PEF1Q9UBV8 284 aaKnown RBP12.1□□□□□ -0.47
LINC00339-207ENST00000634712 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 TGP01266 2768 aa12.1□□□□□ -0.47
LINC00339-207ENST00000634712 PRKDCP78527 4128 aaKnown RBP12.1□□□□□ -0.47
LINC00339-207ENST00000634712 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 TEX22C9J3V5 150 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 K7EIL1 84 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 RAB3DO95716 219 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 KRASP01116 189 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 DEFA4P12838 97 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
LINC00339-207ENST00000634712 TATDN3Q17R31 274 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 ZNF343Q6P1L6 599 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 ELOVL1Q9BW60 279 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 AKIP1Q9NQ31 210 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 CEPT1Q9Y6K0 416 aa12.09□□□□□ -0.47
LINC00339-207ENST00000634712 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 E7EUB6 86 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 SNAPC5O75971 98 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 OR2J3O76001 311 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 MYOD1P15172 320 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 PSMB6P28072 239 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 G6PCP35575 357 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 SCGB2B2Q4G0G5 96 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
LINC00339-207ENST00000634712 DNAH3Q8TD57 4116 aa12.08□□□□□ -0.48
LINC00339-207ENST00000634712 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 CTDSPLO15194 276 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 CD74P04233 296 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 SERPINE2P07093 398 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 AREGP15514 252 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 OR2B8PP59922 312 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 ZNF45Q02386 682 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 DCTN2Q13561 401 aaKnown RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 MEF2DQ14814 521 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 RPEL1Q2QD12 228 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 ZNF585BQ52M93 769 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 TERB2Q8NHR7 220 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 ZFAND1Q8TCF1 268 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 ZNF486Q96H40 463 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 QTRT1Q9BXR0 403 aaKnown RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 FAM212BQ9NTI7 297 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 RSL24D1Q9UHA3 163 aaKnown RBP12.07□□□□□ -0.48
LINC00339-207ENST00000634712 FBXL7Q9UJT9 491 aa12.07□□□□□ -0.48
LINC00339-207ENST00000634712 FABP12A6NFH5 140 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 LY86O95711 162 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 REG1AP05451 166 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 CRYGCP07315 174 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 FGF2P09038 288 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 TRAPPC2P0DI81 140 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 TRAPPC2BP0DI82 140 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
LINC00339-207ENST00000634712 PPP5CP53041 499 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 THOC7Q6I9Y2 204 aaKnown RBP12.06□□□□□ -0.48
LINC00339-207ENST00000634712 ACSM6Q6P461 480 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 LHFPL1Q86WI0 220 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 OR4D10Q8NGI6 311 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 SRSF8Q9BRL6 282 aaKnown RBP12.06□□□□□ -0.48
LINC00339-207ENST00000634712 FKBP11Q9NYL4 201 aa12.06□□□□□ -0.48
LINC00339-207ENST00000634712 A0A1B0GW64 132 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 CYB5BO43169 146 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
LINC00339-207ENST00000634712 AKAIN1P0CW23 69 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 CTRB1P17538 263 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 PI3P19957 117 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 TNFSF8P32971 234 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 PIGPP57054 158 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 RND3P61587 244 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 CADM3Q8N126 398 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 CCDC71LQ8N9Z2 235 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 OR6Q1Q8NGQ2 317 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 HINT2Q9BX68 163 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 COPZ2Q9P299 210 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 PRNDQ9UKY0 176 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
LINC00339-207ENST00000634712 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 TEX50A0A1B0GTY4 177 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
LINC00339-207ENST00000634712 S100A5P33763 92 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms