RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZNF735P0CB33 412 aa12.94□□□□□ -0.34
UBE3D-208ENST00000626828 S100A5P33763 92 aa12.94□□□□□ -0.34
UBE3D-208ENST00000626828 RND3P61587 244 aa12.94□□□□□ -0.34
UBE3D-208ENST00000626828 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
UBE3D-208ENST00000626828 RANGRFQ9HD47 186 aaPredicted RBP12.94□□□□□ -0.34
UBE3D-208ENST00000626828 TMEM140Q9NV12 185 aa12.94□□□□□ -0.34
UBE3D-208ENST00000626828 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 MARCH11A6NNE9 402 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 DISC1C4P0D8 188 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 TEX22C9J3V5 150 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 E7EUB6 86 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 AKAIN1P0CW23 69 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 OR4D10Q8NGI6 311 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 ZNF257Q9Y2Q1 563 aa12.93□□□□□ -0.34
UBE3D-208ENST00000626828 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 A0A087WW49 117 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 NPIPB5A8MRT5 1133 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 SNAPC5O75971 98 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 DHFRP00374 187 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 PRB2P02812 416 aaPredicted RBP12.92□□□□□ -0.34
UBE3D-208ENST00000626828 RPA2P15927 270 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBE3D-208ENST00000626828 ECI1P42126 302 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 ATP5G2Q06055 141 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 EGFEM1PQ0D2K5 195 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
UBE3D-208ENST00000626828 SRSF8Q9BRL6 282 aaKnown RBP12.92□□□□□ -0.34
UBE3D-208ENST00000626828 FAM223BA6NKX1 122 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 OVOL1O14753 267 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 SERPINE2P07093 398 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 CRYGCP07315 174 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 ZP3P21754 424 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 PSMB6P28072 239 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 HOXD3P31249 432 aaPredicted RBP12.91□□□□□ -0.34
UBE3D-208ENST00000626828 G6PCP35575 357 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 INSL3P51460 131 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 PIGPP57054 158 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 OR2B8PP59922 312 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 RHOGP84095 191 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 FAM223AQ8IWN6 122 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
UBE3D-208ENST00000626828 TSC22D3Q99576 134 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 THAP7Q9BT49 309 aaPredicted RBP12.91□□□□□ -0.34
UBE3D-208ENST00000626828 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 COPZ2Q9P299 210 aa12.91□□□□□ -0.34
UBE3D-208ENST00000626828 PEF1Q9UBV8 284 aaKnown RBP12.91□□□□□ -0.34
UBE3D-208ENST00000626828 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 A0A1B0GW64 132 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 ANKRD20A5PA0PJZ0 165 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 ANKRD34BA5PLL1 514 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 PRH1P02810 166 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.34
UBE3D-208ENST00000626828 TRAPPC2P0DI81 140 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 TRAPPC2BP0DI82 140 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 MYOD1P15172 320 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 PI3P19957 117 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 SLURP1P55000 103 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 KRTAP10-11P60412 298 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 ZNF45Q02386 682 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 THOC7Q6I9Y2 204 aaKnown RBP12.9□□□□□ -0.34
UBE3D-208ENST00000626828 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 PRRT1Q99946 306 aa12.9□□□□□ -0.34
UBE3D-208ENST00000626828 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
UBE3D-208ENST00000626828 CGB1A6NKQ9 187 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 DEFA4P12838 97 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 AREGP15514 252 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
UBE3D-208ENST00000626828 CTRB1P17538 263 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 PPP5CP53041 499 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
UBE3D-208ENST00000626828 KLK9Q2XQG4 91 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 CTRB2Q6GPI1 263 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 HSD17B13Q7Z5P4 300 aaPredicted RBP12.89□□□□□ -0.35
UBE3D-208ENST00000626828 ZNF429Q86V71 674 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 OR4C16Q8NGL9 310 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 SEC22AQ96IW7 307 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 QTRT1Q9BXR0 403 aaKnown RBP12.89□□□□□ -0.35
UBE3D-208ENST00000626828 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 KLK9Q9UKQ9 250 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 PRNDQ9UKY0 176 aa12.89□□□□□ -0.35
UBE3D-208ENST00000626828 C3orf85A0A1B0GTC6 90 aa12.88□□□□□ -0.35
UBE3D-208ENST00000626828 H0Y980 276 aa12.88□□□□□ -0.35
UBE3D-208ENST00000626828 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
UBE3D-208ENST00000626828 B3GALNT1O75752 331 aa12.88□□□□□ -0.35
UBE3D-208ENST00000626828 OR2J3O76001 311 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms