RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LAMTOR1Q6IAA8 161 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 TSTD3H0UI37 97 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 IGKV3-20P01619 116 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 EFNA4P52798 201 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 SELENOHQ8IZQ5 122 aaKnown RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 SSC4DQ8WTU2 575 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 TM2D1Q9BX74 207 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 A0A0B4J293 547 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 LOC105371267A0A1B0GV96 52 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 P01737 135 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 IGHV3-23P01764 117 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 ZNF735P0CB33 412 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 ZNF738Q8NE65 137 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 PRSS3P2Q8NHM4 247 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 OSR1Q8TAX0 266 aaPredicted RBP7.75□□□□□ -1.17
GGA3-223ENST00000621870 METRNQ9UJH8 293 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 GOLT1BQ9Y3E0 138 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 DOCK11Q5JSL3 2073 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 KIAA1324LA8MWY0 1029 aaPredicted RBP7.75□□□□□ -1.17
GGA3-223ENST00000621870 IL4P05112 153 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 COMPP49747 757 aaPredicted RBP7.75□□□□□ -1.17
GGA3-223ENST00000621870 TMEM78Q5T7P6 136 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 FAM90A1Q86YD7 464 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 SIGLECL1Q8N7X8 197 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 MRPL30Q8TCC3 161 aaKnown RBP7.75□□□□□ -1.17
GGA3-223ENST00000621870 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 C5orf63A6NC05 138 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 MSGN1A6NI15 193 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 FCN1O00602 326 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 CXorf1O96002 111 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 MOSP00540 346 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 SEC11BP0C7V7 166 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 WT1P19544 449 aaPredicted RBP7.75□□□□□ -1.17
GGA3-223ENST00000621870 SERF2P84101 59 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 FAM24BQ8N5W8 94 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 OR10G8Q8NGN5 311 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 TAF15Q92804 592 aaKnown RBP eCLIP7.75□□□□□ -1.17
GGA3-223ENST00000621870 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 ZNF586Q9NXT0 402 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 TNFSF18Q9UNG2 199 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 PGPA6NDG6 321 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 SRRM5B3KS81 715 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 NPPCP23582 126 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 DDB2Q92466 427 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 LINC00527Q9UJ94 153 aa7.75□□□□□ -1.17
GGA3-223ENST00000621870 MPDU1O75352 247 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 IGKV3-15P01624 115 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 HSPB1P04792 205 aaKnown RBP7.74□□□□□ -1.17
GGA3-223ENST00000621870 UCP3P55916 312 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 SLC16A13Q7RTY0 426 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 TMEM133Q9H2Q1 129 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 PMCHP20382 165 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 TUSC1Q2TAM9 212 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 SP5Q6BEB4 398 aaPredicted RBP7.74□□□□□ -1.17
GGA3-223ENST00000621870 MRPL54Q6P161 138 aaKnown RBP7.74□□□□□ -1.17
GGA3-223ENST00000621870 ZNF880Q6PDB4 577 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 NR2C2APQ86WQ0 139 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 CLRN3Q8NCR9 226 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 SGK494Q96LW2 274 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 NOL4LQ96MY1 436 aaPredicted RBP7.74□□□□□ -1.17
GGA3-223ENST00000621870 NPFFR1Q9GZQ6 430 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 FBXL7Q9UJT9 491 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 TRAPPC1Q9Y5R8 145 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 PLXNA4Q9HCM2 1894 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 TRAV24A0A0B4J272 114 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 IGKV1-12A0A0C4DH73 117 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 FAM90A26D6RGX4 464 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 SIGLEC5O15389 551 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 DEDDO75618 318 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 IGKV1D-12P01611 117 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 IGFBP3P17936 291 aaPredicted RBP7.74□□□□□ -1.17
GGA3-223ENST00000621870 KHDC3LQ587J8 217 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 TUBD1Q9UJT1 453 aa7.74□□□□□ -1.17
GGA3-223ENST00000621870 IGSF23A1L1A6 192 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 CD74P04233 296 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 GPR183P32249 361 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 C20orf204Q6ZNR8 217 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 OR2D3Q8NGH3 330 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 OR10J6PQ8NGY7 276 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 C12orf57Q99622 126 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 MELTFP08582 738 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 KRTDAPP60985 99 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 TMEM187Q14656 261 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 HLA-DRB5Q30154 266 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 PQLC2Q6ZP29 291 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 HSD17B13Q7Z5P4 300 aaPredicted RBP7.73□□□□□ -1.17
GGA3-223ENST00000621870 MAPK1IP1LQ8NDC0 245 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 OR11H4Q8NGC9 324 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 OR51G1Q8NGK1 321 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 GTF3AQ92664 365 aaKnown RBP7.73□□□□□ -1.17
GGA3-223ENST00000621870 DNAJC4Q9NNZ3 241 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 PLXNA3P51805 1871 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms