RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 UNQ5815/PRO19632Q6UWF5 114 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF48Q96MX3 618 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TOMM7Q9P0U1 55 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 ZFC3H1O60293 1989 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 PEX7O00628 323 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 OR2H2O95918 312 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 ASCL5Q7RTU5 278 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 KNTC1P50748 2209 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TRAV24A0A0B4J272 114 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1B0GW15 77 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 M0R381 172 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 GZMMP51124 257 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RPL8P62917 257 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 PEAR1Q5VY43 1037 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 LINC00305Q7Z4B0 112 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TRBV5-3A0A0A0MS03 114 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RBMY1BA6NDE4 496 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RBMY1EA6NEQ0 496 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RBMY1DP0C7P1 496 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 C21orf140B9A014 251 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 CA11O75493 328 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 FSTP19883 344 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 TFF3Q07654 80 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 WDR82Q6UXN9 313 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 PNKDQ8N490 385 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 TRBV5-5A0A0J9YX44 114 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 MOSP00540 346 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 LEAP2Q969E1 77 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 GP6Q9HCN6 339 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 SPAG17Q6Q759 2223 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 PRR33A8MZF0 331 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 CD8AP01732 235 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 PSG1P11464 419 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 FGF12P61328 243 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 CLDND2Q8NHS1 167 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 AMELYQ99218 206 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 HIST1H2BLQ99880 126 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 VKORC1Q9BQB6 163 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 ASCC3Q8N3C0 2202 aaKnown RBP8.44□□□□□ -1.06
COL4A6-210ENST00000621266 MDP1Q86V88 176 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 SMIM8Q96KF7 97 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 CCL13Q99616 98 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 CEACAM1P13688 526 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 HEXA-AS1Q9H8Q6 139 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 KBTBD11-OT1A0A1B0GTJ5 212 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 IZUMO1RA6ND01 250 aa8.44□□□□□ -1.06
COL4A6-210ENST00000621266 IL6RP08887 468 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-210ENST00000621266 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1W2PQD3 144 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 TNFRSF6BO95407 300 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 GLRX5Q86SX6 157 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 RASL10BQ96S79 203 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 CD1AP06126 327 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 ICAM4Q14773 271 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 SLC22A18ASQ8N1D0 253 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 CCL19Q99731 98 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 SF3B5Q9BWJ5 86 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 CNTFRP26992 372 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 MRAPQ8TCY5 172 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 NPCDR1Q9BY65 106 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1W2PPV9 198 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 LY6DQ14210 128 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM171Q8WVE6 324 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 TSPOP30536 169 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 CEACAM21Q3KPI0 293 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF385AQ96PM9 386 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 MRPL32Q9BYC8 188 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
COL4A6-210ENST00000621266 SLC25A15Q9Y619 301 aa8.43□□□□□ -1.06
COL4A6-210ENST00000621266 C9orf172C9J069 976 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms