RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MYOD1P15172 320 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CBLN1P23435 193 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 ELLP55199 621 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-204ENST00000619445 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-204ENST00000619445 GIMAP1Q8WWP7 306 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 FANCD2OSQ96PS1 177 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 ATP6V0BQ99437 205 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 SLC5A7Q9GZV3 580 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 PLEKHA2Q9HB19 425 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 COMMD9Q9P000 198 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 DMRT1Q9Y5R6 373 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 IGLV11-55A0A075B6I3 123 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 ZNF320A2RRD8 509 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 NDUFB8O95169 186 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 BRWD1-AS2P59051 145 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 HERV-K104P61576 105 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 IDNKQ5T6J7 187 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CLEC19AQ6UXS0 136 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 SSX9Q7RTT3 188 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CADM3Q8N126 398 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 OR5AP2Q8NGF4 316 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 AUNIPQ9H7T9 357 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 SRD5A3Q9H8P0 318 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CCL28Q9NRJ3 127 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 UFC1Q9Y3C8 167 aa8.99□□□□□ -0.97
UPF3B-204ENST00000619445 CD7P09564 240 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 AREGP15514 252 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 PTBP1P26599 531 aaKnown RBP eCLIP8.98□□□□□ -0.97
UPF3B-204ENST00000619445 OR2B8PP59922 312 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 ERVK-16P61578 105 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 MXD1Q05195 221 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 DMBX1Q8NFW5 382 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 OR52B4Q8NGK2 314 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 VN1R17PQ8TDU5 208 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 SLC25A38Q96DW6 304 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 S100A16Q96FQ6 103 aaKnown RBP8.98□□□□□ -0.97
UPF3B-204ENST00000619445 QTRT1Q9BXR0 403 aaKnown RBP8.98□□□□□ -0.97
UPF3B-204ENST00000619445 IFT46Q9NQC8 304 aa8.98□□□□□ -0.97
UPF3B-204ENST00000619445 MRPL27Q9P0M9 148 aaKnown RBP8.98□□□□□ -0.97
UPF3B-204ENST00000619445 LYSTQ99698 3801 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 LOC100506127A0A0U1RQW1 187 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 TMEM213A2RRL7 107 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 E7EUB6 86 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 SULT1C2O00338 296 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 UPK2O00526 184 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 TNFSF12O43508 249 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 XRCC3O43542 346 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 ATP6V1G2O95670 118 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 HLA-AP01891 365 aaKnown RBP8.97□□□□□ -0.97
UPF3B-204ENST00000619445 CLEC3BP05452 202 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-204ENST00000619445 SPSB3Q6PJ21 355 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 PLET1Q6UQ28 207 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 RBPMS2Q6ZRY4 209 aaKnown RBP8.97□□□□□ -0.97
UPF3B-204ENST00000619445 CMTM1Q8IZ96 169 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 SLC38A6Q8IZM9 456 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 DEFB125Q8N687 156 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 UXS1Q8NBZ7 420 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 OR1L6Q8NGR2 347 aa8.97□□□□□ -0.97
UPF3B-204ENST00000619445 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
UPF3B-204ENST00000619445 A0A1B0GW64 132 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 IGLC7A0M8Q6 106 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 C8orf88P0DMB2 117 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 S100GP29377 79 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 TAS2R46P59540 309 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 FXYD4P59646 89 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 KCTD21Q4G0X4 260 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 AADACL3Q5VUY0 350 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM61Q8N0U2 210 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 GVQW1Q8N7I0 195 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 GDPD1Q8N9F7 314 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 OR1L8Q8NGR8 309 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 OR5H6Q8NGV6 325 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 GGTLC1Q9BX51 225 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 VCX3AQ9NNX9 186 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM140Q9NV12 185 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 GAR1Q9NY12 217 aaKnown RBP8.96□□□□□ -0.98
UPF3B-204ENST00000619445 FKBP11Q9NYL4 201 aa8.96□□□□□ -0.98
UPF3B-204ENST00000619445 LOC102724200A0A096LPH7 203 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 RBMY1BA6NDE4 496 aaKnown RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 RBMY1EA6NEQ0 496 aaKnown RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 SNAPC5O75971 98 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 RBMY1DP0C7P1 496 aaKnown RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 F2RP25116 425 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 UBE2NLQ5JXB2 153 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 LAMTOR1Q6IAA8 161 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 DHRS11Q6UWP2 260 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM17Q86X19 198 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 OR51H1Q8NH63 302 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 BSCL2Q96G97 398 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 TSC22D3Q99576 134 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 SPAG8Q99932 426 aaPredicted RBP8.95□□□□□ -0.98
UPF3B-204ENST00000619445 C5orf66Q9H5L9 145 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 504.3 ms