RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SLC2A9Q9NRM0 540 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 IGSF23A1L1A6 192 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OGG1O15527 345 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 PITX3O75364 302 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF250P15622 560 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 EGR1P18146 543 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 TAGLN2P37802 199 aaKnown RBP9.07□□□□□ -0.96
POLR2A-209ENST00000617998 WDR89Q96FK6 387 aaPredicted RBP9.07□□□□□ -0.96
POLR2A-209ENST00000617998 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
POLR2A-209ENST00000617998 UBE2V2Q15819 145 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 TMEM41BQ5BJD5 291 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OR5C1Q8NGR4 320 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
POLR2A-209ENST00000617998 A0A0A6YYJ9 748 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 PRSS54Q6PEW0 395 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 A0A087WX48 190 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 F5H768 121 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 PRSS2P07478 247 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 MYPOPQ86VE0 399 aaPredicted RBP9.06□□□□□ -0.96
POLR2A-209ENST00000617998 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 SFT2D2O95562 160 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 MRPL30Q8TCC3 161 aaKnown RBP9.06□□□□□ -0.96
POLR2A-209ENST00000617998 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF146Q15072 292 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 PRSS57Q6UWY2 283 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 AMELYQ99218 206 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 GSX2Q9BZM3 304 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 UBE2MP61081 183 aaKnown RBP9.06□□□□□ -0.96
POLR2A-209ENST00000617998 BATFQ16520 125 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 SPG11Q96JI7 2443 aa9.06□□□□□ -0.96
POLR2A-209ENST00000617998 DOCK9Q9BZ29 2069 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF727A8MUV8 499 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 HGFACQ04756 655 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 UBE2E2Q96LR5 201 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 SRRM5B3KS81 715 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 P01737 135 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 TFF1P04155 84 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 MALP21145 153 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 SPCS2Q15005 226 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 DMKNQ6E0U4 476 aaPredicted RBP9.05□□□□□ -0.96
POLR2A-209ENST00000617998 GLMPQ8WWB7 406 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 PRADC1Q9BSG0 188 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 AICDAQ9GZX7 198 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 SMAD5-AS1Q9Y6J3 95 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 APOC3P02656 99 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 B3GALT5-AS1P59052 145 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
POLR2A-209ENST00000617998 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ABHD1Q96SE0 405 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ANOS1P23352 680 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 MPTX1A8MV57 137 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 OR2C1O95371 312 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 CD1AP06126 327 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 SURF2Q15527 256 aaPredicted RBP9.05□□□□□ -0.96
POLR2A-209ENST00000617998 CTF1Q16619 201 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ACTL10Q5JWF8 245 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF600Q6ZNG1 722 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF257Q9Y2Q1 563 aa9.05□□□□□ -0.96
POLR2A-209ENST00000617998 IGHV1-3A0A0C4DH29 117 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF705DP0CH99 300 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF705BP0CI00 300 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 YIPF5Q969M3 257 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 H7BYZ3 331 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 SLC25A32Q9H2D1 315 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 MMP24Q9Y5R2 645 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 PTHLHP12272 177 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 RNASE4P34096 147 aaKnown RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 H7C1H1 209 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 WISP3O95389 354 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 FOSL1P15407 271 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 G0S2P27469 103 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 RNF144BQ7Z419 303 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 SAV1Q9H4B6 383 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 CRISP2P16562 243 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 TCF23Q7RTU1 214 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 A0A0G2JK05 382 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 CCL24O00175 119 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 C15orf32Q32M92 178 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 WDR73Q6P4I2 378 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 HEPN1Q6WQI6 88 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 PAQR4Q8N4S7 273 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-209ENST00000617998 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
POLR2A-209ENST00000617998 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 Q1RN00 199 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 OR2C3Q8N628 320 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms