RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 NDUFA13Q9P0J0 144 aa19.62■□□□□ 0.73
SURF1-205ENST00000615505 HMX3A6NHT5 357 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 TEX22C9J3V5 150 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 LINC01619G3V211 115 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 HSPB1P04792 205 aaKnown RBP19.61■□□□□ 0.73
SURF1-205ENST00000615505 FGF2P09038 288 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 RPA2P15927 270 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 ECI1P42126 302 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 FOXB2Q5VYV0 432 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 USMG5Q96IX5 58 aa19.61■□□□□ 0.73
SURF1-205ENST00000615505 TRAV3A0A0B4J244 114 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 ANKRD20A5PA0PJZ0 165 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 E7EUB6 86 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 PI3P19957 117 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 PIGPP57054 158 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 FAAP20Q6NZ36 180 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 CADM3Q8N126 398 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 THAP7Q9BT49 309 aaPredicted RBP19.6■□□□□ 0.73
SURF1-205ENST00000615505 ZNF257Q9Y2Q1 563 aa19.6■□□□□ 0.73
SURF1-205ENST00000615505 PTBP1P26599 531 aaKnown RBP eCLIP19.59■□□□□ 0.73
SURF1-205ENST00000615505 G6PCP35575 357 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 PYDC2Q56P42 97 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 REC114Q7Z4M0 266 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 CCDC71LQ8N9Z2 235 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 OR4C16Q8NGL9 310 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 OR13C8Q8NGS7 320 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 COPZ2Q9P299 210 aa19.59■□□□□ 0.73
SURF1-205ENST00000615505 IGHV4OR15-8A0A075B7B6 117 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 A0A087WW49 117 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 NPIPB5A8MRT5 1133 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 SNAPC5O75971 98 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 SERPINE2P07093 398 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 MYOD1P15172 320 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 OR2B8PP59922 312 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 PDLIM3Q53GG5 364 aaPredicted RBP19.58■□□□□ 0.72
SURF1-205ENST00000615505 MARCH1Q8TCQ1 289 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 PRRT1Q99946 306 aa19.58■□□□□ 0.72
SURF1-205ENST00000615505 RANGRFQ9HD47 186 aaPredicted RBP19.58■□□□□ 0.72
SURF1-205ENST00000615505 A0A1B0GW64 132 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 FAM223BA6NKX1 122 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 DHFRP00374 187 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 PRH1P02810 166 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 CTSDP07339 412 aaPredicted RBP19.57■□□□□ 0.72
SURF1-205ENST00000615505 RHOGP84095 191 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 FAM223AQ8IWN6 122 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 C14orf166Q9Y224 244 aaKnown RBP19.57■□□□□ 0.72
SURF1-205ENST00000615505 V9GYH0 126 aa19.57■□□□□ 0.72
SURF1-205ENST00000615505 TRBV9A0A0B4J1U6 114 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 WIPF1O43516 503 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 SURF2Q15527 256 aaPredicted RBP19.56■□□□□ 0.72
SURF1-205ENST00000615505 SPANXN2Q5MJ10 180 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 C9orf66Q5T8R8 295 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 CCDC190Q86UF4 302 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 Q8N402 240 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 NECAP1Q8NC96 275 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 DCUN1D4Q92564 292 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 TSC22D3Q99576 134 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 SRSF8Q9BRL6 282 aaKnown RBP19.56■□□□□ 0.72
SURF1-205ENST00000615505 AKIP1Q9NQ31 210 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 SCP2D1Q9UJQ7 156 aa19.56■□□□□ 0.72
SURF1-205ENST00000615505 C3orf85A0A1B0GTC6 90 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 SEC14L6B5MCN3 397 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 H0Y980 276 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 PRB2P02812 416 aaPredicted RBP19.55■□□□□ 0.72
SURF1-205ENST00000615505 CRYGCP07315 174 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 AREGP15514 252 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 PSMB6P28072 239 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 SLURP1P55000 103 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 ZNF45Q02386 682 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 ATP5G2Q06055 141 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 THOC7Q6I9Y2 204 aaKnown RBP19.55■□□□□ 0.72
SURF1-205ENST00000615505 ZNF343Q6P1L6 599 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 OR51S1Q8NGJ8 323 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 MRGPRFQ96AM1 343 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 QTRT1Q9BXR0 403 aaKnown RBP19.55■□□□□ 0.72
SURF1-205ENST00000615505 FKBP11Q9NYL4 201 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 ZMAT5Q9UDW3 170 aaKnown RBP19.55■□□□□ 0.72
SURF1-205ENST00000615505 PRNDQ9UKY0 176 aa19.55■□□□□ 0.72
SURF1-205ENST00000615505 ANKRD34BA5PLL1 514 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 CGB1A6NKQ9 187 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 OVOL1O14753 267 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 HOXD3P31249 432 aaPredicted RBP19.54■□□□□ 0.72
SURF1-205ENST00000615505 AP3S2P59780 193 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 DEFA5Q01523 94 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 H2BFWTQ7Z2G1 175 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 OR1L8Q8NGR8 309 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 DLX4Q92988 240 aaPredicted RBP19.54■□□□□ 0.72
SURF1-205ENST00000615505 SEC22AQ96IW7 307 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 MCUBQ9NWR8 336 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 SLC2A8Q9NY64 477 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 NSG2Q9Y328 171 aa19.54■□□□□ 0.72
SURF1-205ENST00000615505 TEX50A0A1B0GTY4 177 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 RBMXL2O75526 392 aaKnown RBP19.53■□□□□ 0.72
SURF1-205ENST00000615505 B3GALNT1O75752 331 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 IGKV1-39P01597 117 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 IGKV1D-39P04432 117 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 TRAPPC2P0DI81 140 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 TRAPPC2BP0DI82 140 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 DEFA4P12838 97 aa19.53■□□□□ 0.72
SURF1-205ENST00000615505 CTRB1P17538 263 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms