RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-211ENST00000615061 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 V9GYH0 126 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 GSTZ1O43708 216 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-211ENST00000615061 AREGP15514 252 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 SLURP1P55000 103 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF45Q02386 682 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 OR4A5Q8NH83 315 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 MARCH1Q8TCQ1 289 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 NSG2Q9Y328 171 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 IGKV1-39P01597 117 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 IGKV1D-39P04432 117 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 S100GP29377 79 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 MAS1LP35410 378 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 PIGPP57054 158 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 TTC9CQ8N5M4 171 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 OR13C8Q8NGS7 320 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 DPF1Q92782 380 aa12.91□□□□□ -0.34
CBWD3-211ENST00000615061 ANKRD20A5PA0PJZ0 165 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 DUS4LO95620 317 aaKnown RBP12.9□□□□□ -0.34
CBWD3-211ENST00000615061 REG1AP05451 166 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 OR8U8P0C7N1 319 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 OR2B8PP59922 312 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 KRTAP10-11P60412 298 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 MEF2DQ14814 521 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF79Q15937 498 aa12.9□□□□□ -0.34
CBWD3-211ENST00000615061 C13orf42A0A1B0GVH6 325 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 ANKRD34BA5PLL1 514 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 LINC01619G3V211 115 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 BRI3O95415 125 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 S100A5P33763 92 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 ERVK-16P61578 105 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 RND3P61587 244 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-211ENST00000615061 CCDC190Q86UF4 302 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 DCUN1D4Q92564 292 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-211ENST00000615061 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 THAP7Q9BT49 309 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-211ENST00000615061 AKIP1Q9NQ31 210 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 TRBV12-3P01733 135 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 RHOGP84095 191 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 OR51S1Q8NGJ8 323 aa12.89□□□□□ -0.35
CBWD3-211ENST00000615061 ZNF486Q96H40 463 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-211ENST00000615061 TRBV9A0A0B4J1U6 114 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 OR2J3O76001 311 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 MCRIP2Q9BUT9 160 aaKnown RBP12.88□□□□□ -0.35
CBWD3-211ENST00000615061 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
CBWD3-211ENST00000615061 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-211ENST00000615061 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 NPIPB5A8MRT5 1133 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 SEC14L6B5MCN3 397 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 HSPB1P04792 205 aaKnown RBP12.87□□□□□ -0.35
CBWD3-211ENST00000615061 SP6Q3SY56 376 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 Q8N402 240 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 ZFAND1Q8TCF1 268 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 RTBDNQ9BSG5 229 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-211ENST00000615061 C5orf66Q9H5L9 145 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 FAM212BQ9NTI7 297 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-211ENST00000615061 COPZ2Q9P299 210 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 ZNF257Q9Y2Q1 563 aa12.87□□□□□ -0.35
CBWD3-211ENST00000615061 IGLC7A0M8Q6 106 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 H0Y980 276 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 SERPINE2P07093 398 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 CRYGCP07315 174 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 CTSDP07339 412 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-211ENST00000615061 CTRB1P17538 263 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 PTBP1P26599 531 aaKnown RBP eCLIP12.86□□□□□ -0.35
CBWD3-211ENST00000615061 PSMB6P28072 239 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 EGFEM1PQ0D2K5 195 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 IZUMO4Q1ZYL8 232 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 CTRB2Q6GPI1 263 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 FANCD2OSQ96PS1 177 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 MCUBQ9NWR8 336 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 C3orf85A0A1B0GTC6 90 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 SLC25A42Q86VD7 318 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 OR6Q1Q8NGQ2 317 aa12.86□□□□□ -0.35
CBWD3-211ENST00000615061 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
CBWD3-211ENST00000615061 RANGRFQ9HD47 186 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-211ENST00000615061 OVOL1O14753 267 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-211ENST00000615061 C15orf32Q32M92 178 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 PRRT1Q99946 306 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 HINT2Q9BX68 163 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 SLC2A8Q9NY64 477 aa12.85□□□□□ -0.35
CBWD3-211ENST00000615061 GPR132Q9UNW8 380 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms