RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 K7EPK0 472 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 NBR2O15453 112 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 SLC25A17O43808 307 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 DEDDO75618 318 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 SNAPC5O75971 98 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 PAX6P26367 422 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 PSG5Q15238 335 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 Q5BKY6 102 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 C11orf87Q6NUJ2 197 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 NOXA1Q86UR1 476 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 FAM71E2Q8N5Q1 922 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 OR4A16Q8NH70 328 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 RITA1Q96K30 269 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 HYLS1Q96M11 299 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 ESM1Q9NQ30 184 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
SLIRP-212ENST00000613856 ZNF257Q9Y2Q1 563 aa9.12□□□□□ -0.95
SLIRP-212ENST00000613856 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 H0YIZ8 118 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 BOLA2-SMG1P6H3BVE0 249 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 RRHO14718 337 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 MED6O75586 246 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 TMEM11P17152 192 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 CNTFRP26992 372 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 OR2B8PP59922 312 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 S100A10P60903 97 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 RPL8P62917 257 aaKnown RBP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 HES1Q14469 280 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 MMDQ15546 238 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 LRRC37A5PQ49AS3 106 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 FBLN7Q53RD9 439 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 TMEM65Q6PI78 240 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 MMD2Q8IY49 270 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 OR5B3Q8NH48 314 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 THAP6Q8TBB0 222 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 TAF15Q92804 592 aaKnown RBP eCLIP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 RBMXL1Q96E39 390 aaKnown RBP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
SLIRP-212ENST00000613856 PRDM13Q9H4Q3 707 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 FKBP11Q9NYL4 201 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 C1RLQ9NZP8 487 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 KIAA1456Q9P272 454 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 SIGLEC9Q9Y336 463 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 CMYA5Q8N3K9 4069 aa9.11□□□□□ -0.95
SLIRP-212ENST00000613856 HMSDA8MTL9 139 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 WRBO00258 174 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 LY86O95711 162 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 RLN2P04090 185 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 CD24P25063 80 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 MAS1LP35410 378 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 HILS1P60008 231 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 SPCS3P61009 180 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 POLR2GP62487 172 aaKnown RBP eCLIP9.1□□□□□ -0.95
SLIRP-212ENST00000613856 PRSS8Q16651 343 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 MRGPRG-AS1Q2M3A8 158 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 PPP1R27Q86WC6 154 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 OR11H4Q8NGC9 324 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 PIFOQ8TCI5 191 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 RAB40CQ96S21 281 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 SSX3Q99909 188 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 RNF126Q9BV68 326 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 ZNF430Q9H8G1 570 aaPredicted RBP9.1□□□□□ -0.95
SLIRP-212ENST00000613856 TPSG1Q9NRR2 321 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 PLSCR3Q9NRY6 295 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
SLIRP-212ENST00000613856 TCF19Q9Y242 345 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 NSG2Q9Y328 171 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 LSM5Q9Y4Y9 91 aaKnown RBP9.1□□□□□ -0.95
SLIRP-212ENST00000613856 VWFP04275 2813 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 PLXNB1O43157 2135 aa9.1□□□□□ -0.95
SLIRP-212ENST00000613856 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 E5RGE8 158 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 SYNGR2O43760 224 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 SSSCA1O60232 199 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 RBMXL2O75526 392 aaKnown RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 OR2F2O95006 317 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 PVALBP20472 110 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 F2RL1P55085 397 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 TAS2R30P59541 319 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 HSPE1P61604 102 aaKnown RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 C16orf82Q7Z2V1 217 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 BCL6BQ8N143 479 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 OR5R1Q8NH85 324 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 RBM14Q96PK6 669 aaKnown RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 FBXL15Q9H469 300 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 RBKSQ9H477 322 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 PITPNC1Q9UKF7 332 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 OR51B2Q9Y5P1 312 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms